| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1672 |
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| Symbol | |
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| ID | 5713237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1741348 |
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| End bp | 1742121 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641267588 |
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| Product | ribosomal RNA methyltransferase |
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| Protein accession | YP_001533015 |
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| Protein GI | 159044221 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0293] 23S rRNA methylase |
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| TIGRFAM ID | [TIGR00438] cell division protein FtsJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.193703 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.401181 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTGCT CGAAGACGGG CCCTACTGAG AGAAACGGGA TCATGCCGAA GAAAGCCGGA
AATTCGGGCC GCGGGCAGCG GGACTTGCGT GTGCGGGTCA AGACCGCGCG GGGCCGCAAG
CTCAGCTCGA CCCTGTGGCT GGAGCGGCAG CTGAACGACC CCTATGTGCA GAAGGCCAAG
CGCGAGGGGT ATCGTGGGCG TGCGGCATTC AAGATCCTTG AGATCGATGA GCGCTTCCGC
TTCCTGGTGC CCGGGGCGCG CGTGGTGGAT CTGGGCTGTG CGCCGGGGGG CTGGTGCCAG
GTGGCGGTTC GGCGGGTCAA TGCCCTGGGC GAGAAGTCGG GCAAGGCGCA GGGGCGCGTG
CTGGGCGTCG ACCTCAAGGA GATCGACCCG GTGCCGGGGG CCGAGACCCA CGTGCTCGAC
TTTATGGAGG ACGGCGCGGA CGCGCAGGTC AAGGCGTGGC TGGGGGGCAA GGCCGATGTG
GTGATGTCGG ACATGGCCGC GGCCAGTTCG GGACACAAGC AGACCGATCA TTTGCGCATC
GTTGCCCTGT GCGAGGCGGC GGCCCATCTC GCCTTCGACG TATTGGAAGA GGGCGGCACC
TTCGTTGCCA AGGTGCTGGC GGGCGGGGCG GAGCGGGAGT TGCAGACCCT GCTCAAGCGC
GCCTTCACCA AGGTGATCAA CGTCAAGCCG GATGCCAGCC GATCCGACAG CTCGGAGAAA
TTCGTTGTGG CCACTGGTTT TCGCGGCCTG CCGGAAGCGC GGGATGGCTT ATAA
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| Protein sequence | MACSKTGPTE RNGIMPKKAG NSGRGQRDLR VRVKTARGRK LSSTLWLERQ LNDPYVQKAK
REGYRGRAAF KILEIDERFR FLVPGARVVD LGCAPGGWCQ VAVRRVNALG EKSGKAQGRV
LGVDLKEIDP VPGAETHVLD FMEDGADAQV KAWLGGKADV VMSDMAAASS GHKQTDHLRI
VALCEAAAHL AFDVLEEGGT FVAKVLAGGA ERELQTLLKR AFTKVINVKP DASRSDSSEK
FVVATGFRGL PEARDGL
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