| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1668 |
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| Symbol | nasE |
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| ID | 5713233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1735957 |
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| End bp | 1736298 |
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| Gene Length | 342 bp |
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| Protein Length | 113 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641267584 |
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| Product | assimilatory nitrite reductase [NAD(P)H], small subunit |
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| Protein accession | YP_001533011 |
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| Protein GI | 159044217 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
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| TIGRFAM ID | [TIGR02378] nitrite reductase [NAD(P)H], small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.0880692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.298986 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGG ACTGGATCGA CATCGGCGAA CTCTCGGACA TCCCGGCGCG TGGCGCGCGA
GTGGTCAGGA CCGCCGTGGG TTGCGTGGCG GTGTTCCGCA CCGGATCGGA TGAGGTGTTC
GCACTGCAAA ACCGCTGCCC TCACAAGGGT GGGCCTCTGT CCGAGGGAAT CGTGCATGGC
AAATCGGTGA CCTGTCCACT GCACAACTGG GTGTTCAGCC TGGAAACCGG CGAGGCCCAG
GGCGCGGATG TGGGGCATGT CCGCACCTAT CCCGCGCGGA TCGAGGCGGG ACGCATCCTG
CTGGAGACCA GCTTTCTGCA AGCTCGCATG GCGGCGGAGT GA
|
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| Protein sequence | MSQDWIDIGE LSDIPARGAR VVRTAVGCVA VFRTGSDEVF ALQNRCPHKG GPLSEGIVHG
KSVTCPLHNW VFSLETGEAQ GADVGHVRTY PARIEAGRIL LETSFLQARM AAE
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