| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1664 |
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| Symbol | |
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| ID | 5713229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1730124 |
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| End bp | 1731206 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641267580 |
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| Product | putative ABC transporter permease protein |
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| Protein accession | YP_001533007 |
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| Protein GI | 159044213 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0453487 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0661868 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACCG TCGATCCAGA CTTCGCTGCG AAAGAGGCCA AGCAAGCCCG CCGCGAGCGC
CTCTTCACCC GCATCAACAA GGCCGACGCC TGGCTGAAGG TTCTGGGCCT CGGCTGGATC
ACAACGATGG TCAAGGCCGC CGCGGGCGAC AACCCCAAGG CTCAGATGAA GGACATCTGG
CAGCTGTTCT GCGTGCCGAT CCTGGCCATC GTGCTCTTCC TGACCGCTTG GGGCACGCTG
GCGCCCAAGG TGCAGACATC GCTCGGCGCG GTGCCCGGGC CGGCGCAGGT CTGGGAACAG
GCCGTCGCCC TGCACGAAGA CGCCCAGGCC AAGGCCGAAA GCGCCCGTGT TTTCGAGGAA
CGGGTGGAGC AGCGCAACCA GCGCCTGATC GACGCGGGCC GCGCCGACGA GGTCAAGGAC
ATCGCCTATA CCGGTGCTCC CTCCTATTAC GACCAGATCT GGACCTCGAT CCAGACCGTA
TTCTTCGGCT TTCTTGTGGC GACGGTGGTT GCGGTGCCGC TGGGCATTTC CGCGGGCCTG
TCGGTGACGG CCAACGCCGC GCTCAACCCG ATCATCCAGA TCTTCAAGCC CGTGTCGCCT
CTCGCCTGGC TCCCCATCGT CACCATGGTC GTCTCGGCGG TCTACACCAC CAATGACGGG
CTGTTCGAGA AATCCTTCCT CGTCTCGGCG ATCACGGTCA CGCTCTGCTC GCTGTGGCCG
ACGCTGATCA ACACCGCGCT GGGGGTGTCG TCCATCGACA AGGACCTGGT GAACGTCTCC
AAGGTGCTGA AGATGAACAC CTATACCAAG ATCACCAAGC TGGTGCTGCC CTCGGCCCTG
CCGCTGATCT TCACCGGCCT GCGCCTGTCC CTCGGGGTCG GCTGGATGGT GCTGATCGCG
GCCGAGATGC TCGCGCAGAA CCCCGGCTTG GGCAAATTCG TCTGGGACGA GTTCCAGAAC
GGGTCTTCGG ACAGCCTGGC GCGGATCATG GTCGCCGTGC TGACCATCGG CATCATCGGC
TTCCTGCTCG ACCGGCTGAT GTTCACGATC CAGTCGCTCT TCACCTTCAC GAACAATCGG
TGA
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| Protein sequence | MTTVDPDFAA KEAKQARRER LFTRINKADA WLKVLGLGWI TTMVKAAAGD NPKAQMKDIW
QLFCVPILAI VLFLTAWGTL APKVQTSLGA VPGPAQVWEQ AVALHEDAQA KAESARVFEE
RVEQRNQRLI DAGRADEVKD IAYTGAPSYY DQIWTSIQTV FFGFLVATVV AVPLGISAGL
SVTANAALNP IIQIFKPVSP LAWLPIVTMV VSAVYTTNDG LFEKSFLVSA ITVTLCSLWP
TLINTALGVS SIDKDLVNVS KVLKMNTYTK ITKLVLPSAL PLIFTGLRLS LGVGWMVLIA
AEMLAQNPGL GKFVWDEFQN GSSDSLARIM VAVLTIGIIG FLLDRLMFTI QSLFTFTNNR
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