| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1659 |
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| Symbol | |
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| ID | 5713224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1724839 |
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| End bp | 1725729 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641267575 |
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| Product | metal ABC transporter substrate-binding lipoprotein |
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| Protein accession | YP_001533002 |
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| Protein GI | 159044208 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.00160044 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTTTGC TATCTGGAGT GACCCTTGCC GCCGCTCTTG CCCTGCCGTC CCTCGCGCAT
GCGGAGAAGT TGAAGGCCGT GACCACCTTC ACAGTGATCG CTGACATGGC ACAGAACGTG
GCCGGCGACG CGGCAGAGGT CGTGTCCATC ACCAAGCCGG GGGCGGAGAT CCACGGCTAC
CAGCCGACGC CGCGGGACCT TCTGAAGGCT CAGGACGCGG ACCTGATCCT GTGGAACGGG
CTGAACCTGG AGCTTTGGTT CGAGCAGTTC TTGTCGAACC TGCGCGACGT GCCTGCCGTG
ACGCTGACCG ACGGGATCGA TCCGGTCTCC ATCGGGTCGG GCAGTTACGA GGGCAAGCCG
AACCCGCATG CGTGGATGTC GCTCGATAAC GCGCTTGTCT ATGTCGACAA TATCGCAGCG
GCCTTCGCCG AGCACGATCC GGACAACGCC GAGACCTATC TTGCGAATGC CGAGGCCTAC
AAGGCCGAGA TCACCGCGAC CATCGCCCCG CTGCGTGAGA TGGTGCAGGC GGTGCCCGCC
AGCCAGCGCT GGCTAGTGTC GTGCGAAGGG GCGTTCAGCT ATCTCGCCCG TGATTTCGGG
ATGCAGGAGC TCTATCTCTG GCCCATGAAC GCGGATCAGA CAGGCACACC CCAGCAAGTT
CGCAAGGTCA TCGACGGCGT GCGCGCCAAC GAGATCCCGG TGGTTTTCTG TGAGAGCACC
GTGAACAACG ACCCGGCCGA GCAGGTTGCC CGCGAAACCG GGGCGCGGTT TGGCGGTGTG
CTCTACGTGG ATAGCCTGAC GGGGCCCGAT GGCCCGGTGC CCACATATCT CGATCTGCTG
CGAGTCACCT CCGAGACCGT TGCCGAAGGT CTCACAACCC CTCTCAACTG A
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| Protein sequence | MRLLSGVTLA AALALPSLAH AEKLKAVTTF TVIADMAQNV AGDAAEVVSI TKPGAEIHGY
QPTPRDLLKA QDADLILWNG LNLELWFEQF LSNLRDVPAV TLTDGIDPVS IGSGSYEGKP
NPHAWMSLDN ALVYVDNIAA AFAEHDPDNA ETYLANAEAY KAEITATIAP LREMVQAVPA
SQRWLVSCEG AFSYLARDFG MQELYLWPMN ADQTGTPQQV RKVIDGVRAN EIPVVFCEST
VNNDPAEQVA RETGARFGGV LYVDSLTGPD GPVPTYLDLL RVTSETVAEG LTTPLN
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