Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1657 |
Symbol | |
ID | 5713222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 1723024 |
End bp | 1723923 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641267573 |
Product | ABC-3 metal transporter |
Protein accession | YP_001533000 |
Protein GI | 159044206 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.917643 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.00082794 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGATCGGGA CGCTTCTGGA GCCGTTCAGC TACGGCTACA TGACAAATGC GATCTGGGTC AGCGCGCTGG TTGGGGCGGT CTGTGCCTTT CTGTCGTGTT ACCTGATGCT CAAGGGCTGG TCGTTGATCG GCGACGCGCT GAGCCATGCG ATCGTGCCGG GTGTGGCGGG CGCATACATG CTGGGGCTGC CCTTCGCACT CGGGGCGTTC CTGTCCGGGG GCTTGGCGGC AGGTACAATG CTGTTTCTGA ACCAGCGCTC CGGGCTGAAG GAGGACGCGA TCATCGGTCT GATCTTCACC TCTTTCTTCG GGCTGGGCCT GTTCATGATG TCGATCTCGC CGACATCCGT GGATATCCAG ACCATCATGC TGGGCAATAT CCTGGCGATC ACGCCGACTG ATACAGTGCA GCTGGTTTTA ATCGGAGGCG TGTCGCTCGC CGTGCTTCTG GTGAAGTGGA AGGACCTGAT GGTCACATTC TTCGACGAGA ACCACGCGCG GTCCATCGGG CTGAACCCGG TCCGATTGAA GTTCCTGTTC TTCGTGCTTC TTTCGGCCTG TACGGTCGCA GCGTTGCAAA CGGTTGGCGC TTTTCTCGTG ATCGCCATGG TGGTGACACC GGGCGCGACC GCCTACCTTT TGACCGACCG GTTCCAACGG CTGTTGATCA TCGCGGTCTG CATCGGAGCG GGGAGTGCGG CTGTTGGGGC CTATTTTAGC TACTATCTCG ACGGGGCGAC GGGCGGGATC ATCATTTGCT TGCAGACGCT CCTGTTTCTG CTGGCGTTCT TCTTTGCGCC CAAGCACGGG CGTCTGGCCG CGCGGCGGCG GGCCGCGCGT GGCATGGTCA TGGCACAGCC GTCGGAGGGT GCGACGCGCC CCCTGGAGGC GGCAGAATGA
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Protein sequence | MIGTLLEPFS YGYMTNAIWV SALVGAVCAF LSCYLMLKGW SLIGDALSHA IVPGVAGAYM LGLPFALGAF LSGGLAAGTM LFLNQRSGLK EDAIIGLIFT SFFGLGLFMM SISPTSVDIQ TIMLGNILAI TPTDTVQLVL IGGVSLAVLL VKWKDLMVTF FDENHARSIG LNPVRLKFLF FVLLSACTVA ALQTVGAFLV IAMVVTPGAT AYLLTDRFQR LLIIAVCIGA GSAAVGAYFS YYLDGATGGI IICLQTLLFL LAFFFAPKHG RLAARRRAAR GMVMAQPSEG ATRPLEAAE
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