Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1656 |
Symbol | |
ID | 5713221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 1722176 |
End bp | 1723027 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641267572 |
Product | ABC-3 metal transporter |
Protein accession | YP_001532999 |
Protein GI | 159044205 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.764054 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.000770166 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATCGATA CTCTCTTTGC GCCGTTCCAG TTTCCGTTCA TGCAGAACGC ATTCCTGATC GCGGTGCTCA TTTCGGTGCC CACGGCGATC CTGTCGTGCT TCGTGGTGCT GAAGGGCTGG AGCCTTATGG GCGACGCGAT CAGCCATGCG GTGCTGCCCG GGATCGTACT GGCCTATGTG CTGGGCATCC CGCTGATCTT CGGGGCTTTC GCGGCGGGAA TGACCTGCGC GTTGGCGACG GGATATCTGC AGGCCCACAG CCGGGTGAAG CAGGACACGG TGATGGGGGT GGTGTTCTCG GGGATGTTTG GGCTCGGGTT GGTGATCTAC ACCAAGATCG AGACCAACAT GCACCTTGAC CACATCCTTT TCGGCAACAT GTTGGGGATC GGGTCCGGGG ATCTGGCGAC CGCGGGCATC ATTGCTGTGG TGGTTGCGGG CATCTTGTTG GTGAAATGGC GGGATTTCCT GCTTCATGCT TTCGATCCGG CGCAGGCGCG GGCGGTGGGG CTACGGGTAG CCTGGCTTCA TTACGGGCTT CTGGCGTTGA TTTCGCTGAC CATCGTTGCG GTGCTCAAGG CGGTCGGGAT CATCCTTGCC ATCGGCTTGC TGATCGCGCC CGGGGCGATT GCGTTTCTTG TGACCAAGCG GTTCGTGCAT ATGCTGTGGA TTGCGGTGGC GGTGACGTGC CTCGCGTCAA TCTCCGGTGT CTATGCCAGT TTCTGGCTCG ACAGTGCGCC TGCACCGACA ATCATTCTGA TCCTGTCGGC GGTCTTCGTG GCAGCCTTCG TGCATAAGCT CTGGCGCGCG GGCCGGACAG AACAGCGGAC CGAGCCTTTG CCGGCCCCTT AG
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Protein sequence | MIDTLFAPFQ FPFMQNAFLI AVLISVPTAI LSCFVVLKGW SLMGDAISHA VLPGIVLAYV LGIPLIFGAF AAGMTCALAT GYLQAHSRVK QDTVMGVVFS GMFGLGLVIY TKIETNMHLD HILFGNMLGI GSGDLATAGI IAVVVAGILL VKWRDFLLHA FDPAQARAVG LRVAWLHYGL LALISLTIVA VLKAVGIILA IGLLIAPGAI AFLVTKRFVH MLWIAVAVTC LASISGVYAS FWLDSAPAPT IILILSAVFV AAFVHKLWRA GRTEQRTEPL PAP
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