Gene Dshi_1638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1638 
SymbolemrE 
ID5712783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1700339 
End bp1700668 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content58% 
IMG OID641267554 
Productefflux-multidrug resistance protein 
Protein accessionYP_001532981 
Protein GI159044187 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2076] Membrane transporters of cations and cationic drugs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.381762 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.000000419533 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCATTACG TCGCACTGTT TTGTGCCATC ATCGCCGAGG TTATCGGGAC AAGCGCGCTT 
CAAGCCAGCC AGCAATTCAC GAAACCCGGC CCCTCAGCCG TGGTCGTCAT CGGCTATGGT
CTGAGCTTCT ATTGCATGGC ACTCGCACTG AAGGTGATGC CCCTCGGCAT CGTCTATGCC
GTGTGGTCGG GCATGGGGTT GGTGTGTATC GGCGTGATCG GCTGGATCGT CTTCGGTCAG
AAGCTTGACC TGCCTGCGCT ACTGGGGATC GGATTGATCC TGTCCGGTGT TCTCGTCATC
CACCTGTTCT CGACCACGAC AAGCCTTTGA
 
Protein sequence
MHYVALFCAI IAEVIGTSAL QASQQFTKPG PSAVVVIGYG LSFYCMALAL KVMPLGIVYA 
VWSGMGLVCI GVIGWIVFGQ KLDLPALLGI GLILSGVLVI HLFSTTTSL