Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1638 |
Symbol | emrE |
ID | 5712783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 1700339 |
End bp | 1700668 |
Gene Length | 330 bp |
Protein Length | 109 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641267554 |
Product | efflux-multidrug resistance protein |
Protein accession | YP_001532981 |
Protein GI | 159044187 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2076] Membrane transporters of cations and cationic drugs |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.381762 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.000000419533 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCATTACG TCGCACTGTT TTGTGCCATC ATCGCCGAGG TTATCGGGAC AAGCGCGCTT CAAGCCAGCC AGCAATTCAC GAAACCCGGC CCCTCAGCCG TGGTCGTCAT CGGCTATGGT CTGAGCTTCT ATTGCATGGC ACTCGCACTG AAGGTGATGC CCCTCGGCAT CGTCTATGCC GTGTGGTCGG GCATGGGGTT GGTGTGTATC GGCGTGATCG GCTGGATCGT CTTCGGTCAG AAGCTTGACC TGCCTGCGCT ACTGGGGATC GGATTGATCC TGTCCGGTGT TCTCGTCATC CACCTGTTCT CGACCACGAC AAGCCTTTGA
|
Protein sequence | MHYVALFCAI IAEVIGTSAL QASQQFTKPG PSAVVVIGYG LSFYCMALAL KVMPLGIVYA VWSGMGLVCI GVIGWIVFGQ KLDLPALLGI GLILSGVLVI HLFSTTTSL
|
| |