| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1626 |
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| Symbol | sufD |
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| ID | 5712771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1691270 |
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| End bp | 1692553 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641267542 |
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| Product | sufD |
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| Protein accession | YP_001532969 |
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| Protein GI | 159044175 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
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| TIGRFAM ID | [TIGR01981] FeS assembly protein SufD, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00443555 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGTTTC CGCAGACAAA ACAGACCGCG ACCGAGGCGC GCCTCGCGGC GCTTTCGATG
CCGGATTGCG GCACTTGGGC CAGCGAGGCC CGCGCCGCAG CCCTGTCGCG AGTGCAGAAC
ATGGGCCTGC CGGGGCGTCG GGACGAGTAT TGGAAATACA CCAACCCGAC GCGACTGACA
GACGCCGCGC CGACCCCGGC GGCCCTGTTC GAGCCGAACG AAACGCCTGT GTTTGGCACG
ATGGACCGCA TCAAGATCGT GTTCGTCGAC GGCGTATTCG ATGAAAGTGC TTCCGACGAC
CTGAGCGGTG ATAATGTGGT GATCGAGCGC CTCGCCGAGG CGCAATTGGC AGACATCCAC
TGGGCCAAGG AGGTCTACGG CGTTCTGGAG ACCCGTGGGC AGACCCCGGT TGCGCGTCCC
CTCGCGGCGC TGAACACGGC TTTTGCCTCC GATGGCGTGC TGATCCATGC GACAGGCCCG
GTCTCCAAGC CGGTTTCTCT GATCTATCTG CACAAGGACG AAGCGTCGGA CGCTATCCTG
CACCATGCGA TCAAGGTGGA GACCGGCGCC TCCCTTACTG TTCTGGAGAA CGGGCCAGCA
GCGGCGCGGT TCAACAAGTG CATGGAGATC GAGATCGCCG ATGGCGGTGA GTTCCACCAT
GTGCGGACCC AGGGCCGTGA TCACGAACGT CAGGCCGCGA CCCACATGTT CACAAGGCTC
GGGGCGGAAT CGGTCTTCAA GTCCTTCACC ATGACCGCCA ATGGCGTGCT GACCCGCAAC
GAGGTCATCA TCGAGATGAC TGGCGACAAT GGTGTTGCTC ATGTGGCGGG CTGCTGTGTC
GGGGATGGGG ATTTTCACCA TGACGATACG GTGTTCGTGA CCCATGACGC GCTGAACTGT
GAAAGCCGCC AGGTGTTCAA GAAAGTGCTG CGCAATGGTG CGACTGGCGT TTTCCAGGGC
AAGATCCTTG TGAAGGAGGG CGCGCAGAAA ACCGACGGCT ATCAGATCAG CCAGTCGCTT
CTTCTCGATG AGGACAGCCA GTTCCTCGCC AAGCCCGAGC TGGAGATCTA CGCCGATGAT
GTCGCGTGCT CTCACGGCTC GACTTCGGGG GCGATAGATG AGGAAGGCCT GTTCTACCTG
CGCTCCCGCG GCATCCCGGA AGGTCTTGCC ACTGATCTGA TGGTGCTGGC GTTTCTCGCC
GAAGCAATCG AAGAGATCGA GGAAGAGGCC CTCGCCGAAG AGGTCACCGA ACGTCTCGGA
AACTGGCTGG CGCGCCGCCG CTGA
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| Protein sequence | MAFPQTKQTA TEARLAALSM PDCGTWASEA RAAALSRVQN MGLPGRRDEY WKYTNPTRLT
DAAPTPAALF EPNETPVFGT MDRIKIVFVD GVFDESASDD LSGDNVVIER LAEAQLADIH
WAKEVYGVLE TRGQTPVARP LAALNTAFAS DGVLIHATGP VSKPVSLIYL HKDEASDAIL
HHAIKVETGA SLTVLENGPA AARFNKCMEI EIADGGEFHH VRTQGRDHER QAATHMFTRL
GAESVFKSFT MTANGVLTRN EVIIEMTGDN GVAHVAGCCV GDGDFHHDDT VFVTHDALNC
ESRQVFKKVL RNGATGVFQG KILVKEGAQK TDGYQISQSL LLDEDSQFLA KPELEIYADD
VACSHGSTSG AIDEEGLFYL RSRGIPEGLA TDLMVLAFLA EAIEEIEEEA LAEEVTERLG
NWLARRR
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