| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1623 |
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| Symbol | sufS |
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| ID | 5712768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1688923 |
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| End bp | 1690143 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641267539 |
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| Product | cysteine desulfurase |
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| Protein accession | YP_001532966 |
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| Protein GI | 159044172 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0344832 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACAACG TTGATGAGAT CCGGTCTGAT TTTCCGATTC TGTCGCGCCA AGTGAACGGC
AAGCCACTGG TCTATCTCGA CAATGGGGCG TCGGCGCAAA AGCCACAGGT CGTGATTGAT
GCAGTCACCC GCGCTTACGC TGAGGAATAC GCCAATGTAC ACCGCGGCCT GCACTATTTG
AGCAATCTCG CCACCGAGAA ATACGAAAGC GTGCGTGGTA CTATCGCGCG GTTCTTGGGC
GTGGCGGACG AAAACCAGAT TGTCCTGAAT TCCGGGACCA CCGAAGGGAT CAACCTCGTC
GCCTATGGCT GGGCCATGCC CCGGATGGTG GCTGGCGACG AGATCGTTCT GTCGGTGATG
GAGCACCACG CCAACATCGT GCCATGGCAT TTTTTGCGAG CGCGACAGGG CGTGGTCCTG
AAATGGGTCG ACGTTGATGC CACCGGTGCG CTTGATGCGC AGAAAGTCAT CGACGCGATC
GGTCCGAAAA CCAAGCTCGT AGCCATCACG CAACTGTCGA ATGTCCTAGG CTGCAAGGTC
GACGTAAAGG CGATCACCGA GGCGGCCCAC GCCAAGGGCG TGGCTGTTTT GGTGGATGGC
AGCCAGGCGG CCGTTCATAT GCCCGTGAGT GTCGACGATC TTGGCTGCGA TTTCTATGCC
ATCACAGGGC ACAAGCTCTA TGGGCCCTCG GGGTCCGGTG CGATCTTCAT CAAGTCCGAG
CGGATGGCTG AGATGCGGCC TTTCATCGGG GGTGGGGATA TGATCCGCGA TGTGACGCGG
GAGTTTGTCA CCTACAACGA CCCGCCAATG AAGTTCGAGG CCGGCACACC GGGTATTGTG
CAGACCATCG GACTTGGCGT GGCTCTCGAT TACATGATGG GTCTTGGGAT GGAGAATATC
GCTGCCCATG AAGACAAGCT GCGGGATTAT GCGCGCACCC GGCTCGATGG ATTGAACTGG
TTGAATGTGC AGGGTCAGAC ACCGGACAAG GCTGCTATTT TCTCGTTCAC GCTGGAGGGG
GCAGCACATG CCCATGATAT CTCCACCGTG CTAGACAAGA AGGGCGTTGC AGTACGCGCT
GGCCATCACT GCGCCCAGCC TTTGATGGAA CATATGGGCG TTCCAGCGAC CTGTCGCGCA
TCCTTCGGGC TCTACAATAC AGAGGCCGAG GTGGATGTGC TGGTGGATGC GCTGGAGCTT
TGTCACGAGC TGTTCGGGTA G
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| Protein sequence | MYNVDEIRSD FPILSRQVNG KPLVYLDNGA SAQKPQVVID AVTRAYAEEY ANVHRGLHYL
SNLATEKYES VRGTIARFLG VADENQIVLN SGTTEGINLV AYGWAMPRMV AGDEIVLSVM
EHHANIVPWH FLRARQGVVL KWVDVDATGA LDAQKVIDAI GPKTKLVAIT QLSNVLGCKV
DVKAITEAAH AKGVAVLVDG SQAAVHMPVS VDDLGCDFYA ITGHKLYGPS GSGAIFIKSE
RMAEMRPFIG GGDMIRDVTR EFVTYNDPPM KFEAGTPGIV QTIGLGVALD YMMGLGMENI
AAHEDKLRDY ARTRLDGLNW LNVQGQTPDK AAIFSFTLEG AAHAHDISTV LDKKGVAVRA
GHHCAQPLME HMGVPATCRA SFGLYNTEAE VDVLVDALEL CHELFG
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