| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1621 |
|---|
| Symbol | |
|---|
| ID | 5712765 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | - |
|---|
| Start bp | 1685849 |
|---|
| End bp | 1686799 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641267536 |
|---|
| Product | putative 6-phosphofructokinase isozyme 2 |
|---|
| Protein accession | YP_001532964 |
|---|
| Protein GI | 159044170 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1105] Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) |
|---|
| TIGRFAM ID | [TIGR03168] hexose kinase, 1-phosphofructokinase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.106511 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTCGTA TTGTGACGCT GACACTCAAT CCAGCCTTGG ATTCGTCGAC CGATGCCGAA
CACGTTGCGC CGGACCTGAA ACTTCGCTGC TCTGCGCCCC GCGCCGATGC GGGGGGCGGA
GGCGTCAATG TCTCCAGAGC CATTGCGTTT CTCGGCGGAC AATCTCTTGC GGCGCTCGCG
CTTGGCGGCG GGCCAGGGGA GCGGGTTCGA CAGCTTCTTC GAGTGGAGGG TATTCCGGTG
CATGATCTCG GCGTGGCTGT GGAAACGCGC CAGAACCTGT CGGTCATCGC GCGGGATACC
GGCGCGCAGT ATCGCTTCAT CATGCCCGGA CAGACCTGGA CGGACGTGGA TGTTGATCGA
TCATGTGAGG CGCTCTGCAA ACTGGCGAGG GCCGGGGATC TGATCGTGCC ATCGGGCAGC
TTACCACCAG GTGTCGGCCC GGGTGATCTC GTAGCGCTGA CCAATCGCCT TGCTGTGCTG
GGAGTTCGGA TCGTTCTTGA TACGTCCGGG GCCGCTTTGC AGGCCTTCGC AACAGGAAGG
GCCAAAACCC TTCATGTGCT GCGGATGGAT CTCGAGGAAG CACAGTCGCT TGCAGGCCGG
GACCTCGACA CAGTTGCGGA TGTGGCGCAG TTCGGGCGGG AGCTGGTGGA CGCGGGGGCT
GCAAAAAGCG TGATTGTAGC CAAGGGAGCG GAAGGCAGTA TTCTTGTCAC ATCACGCGGG
CAGGGCTGGC ATGTGCGCCC CCCAAAGGTG AACGTGGTCA GCAAGACCGG TGCTGGAGAC
AGTTTTGTGG CGGGGTTCAC GCTGGCTCTC GCACAAGGTT CGTCCGATCT GGAAGCGACT
GTGAGAGGGG TCGGCGCTGC AGCTTCTGCT GTGACAACGC CTGATACGGA CTTGTGCGAC
GGCGCGTCCG CGGAACGTTA CGCTGCGCTG TCCACCGTGA CGGAACTCTG A
|
|---|
| Protein sequence | MTRIVTLTLN PALDSSTDAE HVAPDLKLRC SAPRADAGGG GVNVSRAIAF LGGQSLAALA
LGGGPGERVR QLLRVEGIPV HDLGVAVETR QNLSVIARDT GAQYRFIMPG QTWTDVDVDR
SCEALCKLAR AGDLIVPSGS LPPGVGPGDL VALTNRLAVL GVRIVLDTSG AALQAFATGR
AKTLHVLRMD LEEAQSLAGR DLDTVADVAQ FGRELVDAGA AKSVIVAKGA EGSILVTSRG
QGWHVRPPKV NVVSKTGAGD SFVAGFTLAL AQGSSDLEAT VRGVGAAASA VTTPDTDLCD
GASAERYAAL STVTEL
|
|---|
| |