| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1618 |
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| Symbol | lpxD |
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| ID | 5712762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1682224 |
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| End bp | 1683315 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641267533 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| Protein accession | YP_001532961 |
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| Protein GI | 159044167 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.23411 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTCTATT CCCTATCCCG GATCGCTGAG GCGCTTGGAG CACAGGTCGT CGGCAACGCC
GACCTGACGG TTCGAGGCGC CTCAGAGCCT GCTATCGCAG GGCCCGACGA ATTGGCGCTT
GCGATGGATC CGAAATATGC GGACGGCCTT GCCCAAGGCA AGGCCCGTGC GGCGATGTTG
TGGGGCGATG CGCCTTGGCA GGACTTCGGG CTCGAAGGCG CGATCCTCGT GTCACGCGCC
CGGTATGCCA TGTCCGGTTT GACGACGCTG ATGGACCCGG GCCCGGAAAT CGCACAGGGG
ATTCACCCGA CCGCCGTGAT CGCTCCGACC GCCGAGATCG GACCGGACGC CGCCATCGGC
CCCTTCGTCG TGATCGGTCG CGCAGCAAGG ATCGGCCCGC GCGCCCGCAT AGCAGCCCAT
TGCGTCATTG CCGAAGAGGC CGTGCTGGGG GAGGACACCC TGCTCCATGC CGGGGTCAAG
ATCGGCGCGC GCGTGATCCT CGGGGACCGG ACGATCTGCC AGCCCGGGGC AAGCATCGGG
TCGGACGGTT TTTCCTTCGT GACGCCGGAG ACATCGGCGG TGGAGGAAGT GCGCAAAACT
GTCGGCGCCC GGGGCGATGC TGTTGGACAA AGTTGGACCC GCATCCACTC TCTCGGTTCG
GTCGAGATCG GTGCGGATGT AGAGATCGGC GCGAATAGCT GCATCGACCG GGGCACGATC
CGCAACACGA CCATCGGGCG GGGTACCAAG CTCGACAACC TCGTGCACAT TGGCCACAAC
GTCCAGATCG GCGAGGACTG CCTGCTGTGC GGTCAGGTCG GGATCGCCGG GTCGAGCCGG
ATCGGAAACC GCGTGGTGCT GGCTGGGCAG GTGGGTGTGA ACGACAATAT CGTCATCGGA
GACGATGTGA TCGCCGGGGG GGCGACGAAG ATCTTCACCA AGACCCCTGC AGGCCGGGTG
CTGCTCGGCT ATCCGGCGAT GAAGATGCAA TCCCATGTGG AAAGCTACAA GGCGATCCGC
CGCCTCCCGC GGCTGGCTCA GCAGGTCGCA GAGCTTCAGA AAGCTGTTTC AAAACTGACG
CGTAATGACT AA
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| Protein sequence | MVYSLSRIAE ALGAQVVGNA DLTVRGASEP AIAGPDELAL AMDPKYADGL AQGKARAAML
WGDAPWQDFG LEGAILVSRA RYAMSGLTTL MDPGPEIAQG IHPTAVIAPT AEIGPDAAIG
PFVVIGRAAR IGPRARIAAH CVIAEEAVLG EDTLLHAGVK IGARVILGDR TICQPGASIG
SDGFSFVTPE TSAVEEVRKT VGARGDAVGQ SWTRIHSLGS VEIGADVEIG ANSCIDRGTI
RNTTIGRGTK LDNLVHIGHN VQIGEDCLLC GQVGIAGSSR IGNRVVLAGQ VGVNDNIVIG
DDVIAGGATK IFTKTPAGRV LLGYPAMKMQ SHVESYKAIR RLPRLAQQVA ELQKAVSKLT
RND
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