| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1613 |
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| Symbol | |
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| ID | 5712757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1676755 |
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| End bp | 1678056 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641267528 |
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| Product | UPF0053 inner membrane protein |
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| Protein accession | YP_001532956 |
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| Protein GI | 159044162 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4536] Putative Mg2+ and Co2+ transporter CorB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.405489 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.446608 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCCGA CTTTACTCGA TTCGTCTTTC TGGATTTCCT GTGCCGTCAT CCTGGTGCTC
TTGTGCTGCT CGGGGTTCTT TTCGGGCAGC GAGACCGCAT TGACCGCCGC CTCCCGCGGC
AAGCTGCATG CCATGGCCGA CAAGGGCAAC AAGGGCGCCG AACGGGCCCT GAAGCTGAAG
GAGGACAATG AACGGCTGAT CGGCGGGATC CTTCTGGGCA ACAACCTCGC CAATATCCTC
GCGACCTCAT TGGCCACCGC AGTGTTCACC AAGGCTTTCG GTGACAGCGG CGTGGCCTTG
GCGACCCTCG TGATGACGGC GCTGGTGCTG ATCTTTGCAG AGGTTCTGCC CAAGACGTAC
GCGATTACCA ACCCCGAGAG CGCCTCGACC CGGGCGGCGG GGCTTGTGGG CATGGTCATT
ACCGTGCTGG CGCCGCTTGT AGCGGCTGTC CGTTTTATCG TCCGGGGTGT GCTGCGCCCA
CTTGGGGTTC GGATCGAGGC CGGGGCGAAC ATGCTGTCGG TGCGCGAAGA GATCGAAGGG
GCCCTGCGCA TGGGGCATTC CGAAGGGGCC GTGGAAAAGG AGCATCGCGA CCGGCTGCTC
GGCGCACTCG ACCTCAACGA GCGCAACGTG GAGGAGATCA TGTTGCACCG CTCGAAAATC
GAAATGATCG ATGCGGAAAA CACACCCGAA CAGGTGCTCA GCCAGTGCTT GCAATCTCCC
CACACGCGCT TGCCGATCTT TCGGGAAGAT CGGGAAAACA TCATCGGTGT GATCCATGCC
AAGGATCTGC TGCGCGCGAT GGACAAGGTG ATGCGCGGAC CGGACGCCTC GGAAAAGGCG
CTGGAGGCAT TCGAGGTCAC CGATGTGGCG ATGAAGCCCT ATTTCATTCC CGAGACCACG
ACTCTCGATG AGCAGATGAA GGAATTTCTG CGCCGCCGGA CTCATTTCGC CCTGGTGGTG
GACGAGTACG GCGCGTTGCA GGGGCTGATC ACGCTGGAAG ACATTCTCGA AGAAATCGTC
GGCGAGATCA CGGACGAGTT CGACCCGGAT GCGGACCACC CGGTGCGCAA GGCCGAGGAT
GGCAGTTTCA TCGTGGACGG AGCCATGACG ATCCGCGATC TCAACCGGGC GACCGAATGG
AACCTGCCCG ACGAAGAGGC CATCACCGTC GCTGGTCTGG TGATCCATGA GGCGCAGATG
ATCCCGAGCA TCGGCCAATG CTTCAGCTTC CACGGATTCC GCTTCGAGGT CGCCGGCCGC
AAGGACAACC GCTTGTCCAA GCTGAAGATC CGCCCCCTCT AA
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| Protein sequence | MDPTLLDSSF WISCAVILVL LCCSGFFSGS ETALTAASRG KLHAMADKGN KGAERALKLK
EDNERLIGGI LLGNNLANIL ATSLATAVFT KAFGDSGVAL ATLVMTALVL IFAEVLPKTY
AITNPESAST RAAGLVGMVI TVLAPLVAAV RFIVRGVLRP LGVRIEAGAN MLSVREEIEG
ALRMGHSEGA VEKEHRDRLL GALDLNERNV EEIMLHRSKI EMIDAENTPE QVLSQCLQSP
HTRLPIFRED RENIIGVIHA KDLLRAMDKV MRGPDASEKA LEAFEVTDVA MKPYFIPETT
TLDEQMKEFL RRRTHFALVV DEYGALQGLI TLEDILEEIV GEITDEFDPD ADHPVRKAED
GSFIVDGAMT IRDLNRATEW NLPDEEAITV AGLVIHEAQM IPSIGQCFSF HGFRFEVAGR
KDNRLSKLKI RPL
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