Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1609 |
Symbol | aroK |
ID | 5712753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 1672630 |
End bp | 1673187 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641267524 |
Product | shikimate kinase |
Protein accession | YP_001532952 |
Protein GI | 159044158 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0703] Shikimate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.451303 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCGAGG CAGCAACTCT TAAGCTGACC GCGCCGGTGG TGCTCGTAGG GATGATGGGC GCGGGAAAGA CCGCCGTCGG AGGGGCAGTG GCCGCGCAGC TCGGCGTGCC CTTCATCGAC AGCGATCACG AGATCGAGCA AGCCGCCAAT GCCAAGATCG CGGAGATTTT CGAACGGGAC GGGGAGGCGT TTTTTCGCGA CCGTGAGACC GAAGTTCTCG CCAGGCTTCT TGGTGGAGTG CCTGCGATCC TGTCCACGGG CGGCGGGGCC TTCCTGGCCG AACGCAATCG GGCGTTGATT GCCGAGAAGG GCGTGTCTGT CTGGCTCGAC GCGGAGCTCG AGCTGCTATG GAGCCGGGTC CGGCACAAGT CGACGCGCCC GCTGTTGTTG ACTGACAACC CCAAGGCGAC GCTGGCCGAA ATTTACGCCC AGCGTGTCCC GGTCTATGCC AAGGCCGCGT TGCATGTGAA AGCCGCACCG GAGCTCTCCA TCGACCAGAT GGCCAGCCGG GTGATCGCAG CCCTGCGGGC GCATCCGGGT CTGATGGCCG AGTCGTGA
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Protein sequence | MAEAATLKLT APVVLVGMMG AGKTAVGGAV AAQLGVPFID SDHEIEQAAN AKIAEIFERD GEAFFRDRET EVLARLLGGV PAILSTGGGA FLAERNRALI AEKGVSVWLD AELELLWSRV RHKSTRPLLL TDNPKATLAE IYAQRVPVYA KAALHVKAAP ELSIDQMASR VIAALRAHPG LMAES
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