Gene Dshi_1604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1604 
Symbol 
ID5712748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1667840 
End bp1668634 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content64% 
IMG OID641267519 
Productenoyl-CoA hydratase 
Protein accessionYP_001532947 
Protein GI159044153 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.284722 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.630859 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAGG ATCTTCTTTT ACGCAGCGAT GCGGACGGGA TCGCAACGCT GACGCTGAAT 
GCACCGCAGA GCCTGAACGT GTTGTCGGAC GCGATGCTGG CTGCGCTGCA GGCACAGATC
GACACACTGG CCGAGGACCG CACCACTCGG GTGGTCGTGC TGCGCGGGGC CGGACGGGCG
TTCTGCGCGG GCCATGATCT CAAGGAGATG ACGGCCGCGC GGCAGTCCGA GGATGGTGGG
GCCGCGGCCT TCAAGGATCT CTTCGATCGA TGCGCGCGCA TGATGATGGG ACTGCAAGCT
CTGCCCCAGC CGGTAATCGC CCAGGTCCAC GGCATCGCCA CGGCGGCGGG GTGCCAATTG
GTGGCCACCG CCGATATGGC CGTTGCCGCC GAGGGGGCGC GATTTGGGGT GAACGGTGTG
AATATCGGGC TGTTCTGTTC GACCCCGATG GTGGCGCTCA GCCGCAACAT TCCGCGCAAG
CAGGCCTTTG AGTTGTTGAC GACCGGCGAG ATGATCGAGG CGCAGAAGGC GCAGGCTCTC
GGCTTGGTCA ATCGGGTGGT GCCAACCGAA GATCTGGAGG CGGAGACAAA CGCGCTTGCC
ACCAAAGTGG CCGAGAAGCG CGGGGCCGTG GTCGCCATCG GCAAAAGGGC CTTTTACGAG
CAGTCACAGA TGAGCCTCGC CGACGCGTAT GCGTTTACAG GGAATGTCAT GGTGAAGAAC
ATGGCGTTGC GCGACACCGA GGAAGGGATC GCCGCATTTC TTGATAAACG CCCGCCGAAC
TGGTCGGACG GCTAG
 
Protein sequence
MAEDLLLRSD ADGIATLTLN APQSLNVLSD AMLAALQAQI DTLAEDRTTR VVVLRGAGRA 
FCAGHDLKEM TAARQSEDGG AAAFKDLFDR CARMMMGLQA LPQPVIAQVH GIATAAGCQL
VATADMAVAA EGARFGVNGV NIGLFCSTPM VALSRNIPRK QAFELLTTGE MIEAQKAQAL
GLVNRVVPTE DLEAETNALA TKVAEKRGAV VAIGKRAFYE QSQMSLADAY AFTGNVMVKN
MALRDTEEGI AAFLDKRPPN WSDG