Gene Dshi_1600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1600 
Symbol 
ID5712744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1665720 
End bp1666031 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content57% 
IMG OID641267515 
Productmonooxygenase 
Protein accessionYP_001532943 
Protein GI159044149 
COG category[R] General function prediction only 
COG ID[COG2329] Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.299485 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.882379 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCTCA CCATGAACCG TTTTCGTGTC AAAGCCGGTC AGGAAGACAC GTTCGAAGAT 
GTCTGGAAGT CCCGCGACAG CCACCTGAAA ACCGTGGATG GTTTCGTATC CTTCCACCTC
ATGAAGGGCG AAGAGAGCGA TGGTGTCCGC CTCTATGCGT CGCACACCCT GTGGCGCGAT
CGGGCAGCGT TCGAAGGCTG GACCAAATCC GAAGCTTTCC GCATGGCTCA CAAGGGCGCG
AAATCCAGTG CGGACATGTA TGACGGACCC CCGGTGCTGG AGGTCTTCGA CAGCGTACAG
GAGCTGAGCT GA
 
Protein sequence
MFLTMNRFRV KAGQEDTFED VWKSRDSHLK TVDGFVSFHL MKGEESDGVR LYASHTLWRD 
RAAFEGWTKS EAFRMAHKGA KSSADMYDGP PVLEVFDSVQ ELS