| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1599 |
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| Symbol | potB |
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| ID | 5712743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1664723 |
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| End bp | 1665604 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641267514 |
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| Product | spermidine/putrescine transport system permease protein |
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| Protein accession | YP_001532942 |
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| Protein GI | 159044148 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.120621 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACAC GAAACACGAC AGCGCGGCGC AGTGAGGCCA TGCAAGGCTA CGTCATGGTC
AGCCCGCCGC TGATCTTTAC GATTCTGCTG CTTGCCGTTC CCCTCGTTGC AATTCTGGTG
CTCAGTTTCT GGACCCAGAA CTTCATGGAG TTCGATCGCA GCTTCACCTT GGCGAACTAC
CGGGAAGCGG TCACAGACCC GATCTATGGC ACGCTGATGG GCCGGTCCCT GTGGATCGCC
GGGATGGTGA CTGTGGTGAC CGTGGTGCTG GCCTTTCCCA TCGCCTATTT CGTGTCCTTC
CACGTCCCGC AGAACCGTAA GGCGCTATGG ATTTTTCTGA TCACGGTCCC GTTCTGGACC
TCCTACCTGC TCCGCGTGTT CCTTTGGAAG GTAATCCTCG GCTTCAACGG AGTTCTCAAC
TCTGGTCTGC AAGGGCTTGG TATCATTGAG GAGCCACTGA CTTTCCTGCT CTATAACGCC
AATGCGGTCG TGATCACGCT TGCCCACGCT TACGCGCCCT TCACGATCCT GCCGATCTAC
GTGGCGCTCG AGAAAATCGA CCGCTCCCTG CTGGAGGCCG CGCGCGACCT GGGCGAGAGC
GCCTGGGGCG CGTTTTGCCG GATCACGCTG CCCCTAGCCA TGCCCGGGAT CGTGGCCGCG
ACCCTGATTG TGTTCATTCC GGTGATCGGC GACTACGTTA CACCCCGGCT TGTTGGGGGG
CCTGACGGTC TGATGATCGC CAACATGATC CAGACCCAGT TCCTGCGTCT GAACGATGCG
CCCATGGGCG CGGCCCTCGC GGTTTCTGCC ATGACCATCG TCAGCGCCAT CGCCCTGCTT
GTGGTGTTTG TGACCCGCAA CATCGGGCGG GCCCCCAAAT GA
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| Protein sequence | MTTRNTTARR SEAMQGYVMV SPPLIFTILL LAVPLVAILV LSFWTQNFME FDRSFTLANY
REAVTDPIYG TLMGRSLWIA GMVTVVTVVL AFPIAYFVSF HVPQNRKALW IFLITVPFWT
SYLLRVFLWK VILGFNGVLN SGLQGLGIIE EPLTFLLYNA NAVVITLAHA YAPFTILPIY
VALEKIDRSL LEAARDLGES AWGAFCRITL PLAMPGIVAA TLIVFIPVIG DYVTPRLVGG
PDGLMIANMI QTQFLRLNDA PMGAALAVSA MTIVSAIALL VVFVTRNIGR APK
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