| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1598 |
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| Symbol | |
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| ID | 5712742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1663920 |
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| End bp | 1664726 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641267513 |
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| Product | inner membrane ABC-transporter permease protein |
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| Protein accession | YP_001532941 |
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| Protein GI | 159044147 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.131611 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.983656 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCC GGGTGTTGTG GACCTATGCG GTGGTGTATT TGGTTTTCCT CTACCTGCCG
GTGGCCTTGC TGCCGATTTT CGCTTTCAAC GACAGCACAA TCATCGCCTT TCCACTCAGT
GGTTTCACTA TAAGCTGGTT CGTGGAACTG ACCCAGATCC CGGCGTTGCA TGACGCGGTG
CGCAACTCGC TGATCATCGC GCTGTCGACG GCCGTGTTTT CCACGGCGCT CGGAGTGTTT
GCGTCGCGTG CGGCCACGCG GTTCGAGTTT CCGGGCAAGG CGGGGATCAT GGGGTTCATT
ATGATCCCGC TGGTGCTGCC CGAGATTATT GTCGCGGTTT CATTGCTGGT GGTGTTGCTG
CAAATGGGCC TCAACCTGTC GCTTTGGGCG GTTATCCTCG GGCATACCCT GATCTGCACA
CCGTTCTGCA TCGCCATCCT GTCAAGCAGC TTCAGCGGCC TCGACAGGTC GCTCGAAGAA
GCCGCCATCG ATTTGGGCGA GACGCGTCTC AGCGCGTTCC GGCTCATCAT TTTGCCGCTG
GTGGCCCCCG GCATCGTCGC CTCGCTTCTC ATCTCGTTCA CCATTTCACT GGACGAGTTC
ATCATTGCCT TTTTCCTGAC CGGCACCGAC CCGACCTTGC CGGTCTATAT CTGGAGCCAG
CTACGCTTCC CGCAGAAGCT GCCTGTGATC ATGGCGCTGG GAACGATCCT CATTCTGCTG
TCTCTCGTTC TGATCATCAC CGCCGAAGCC TTCCGCCGAC GCGGCTTGCG CAAGAGCGGC
CAGACCGACA CCGGAGGGTT CTTGTGA
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| Protein sequence | MSRRVLWTYA VVYLVFLYLP VALLPIFAFN DSTIIAFPLS GFTISWFVEL TQIPALHDAV
RNSLIIALST AVFSTALGVF ASRAATRFEF PGKAGIMGFI MIPLVLPEII VAVSLLVVLL
QMGLNLSLWA VILGHTLICT PFCIAILSSS FSGLDRSLEE AAIDLGETRL SAFRLIILPL
VAPGIVASLL ISFTISLDEF IIAFFLTGTD PTLPVYIWSQ LRFPQKLPVI MALGTILILL
SLVLIITAEA FRRRGLRKSG QTDTGGFL
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