| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1597 |
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| Symbol | potA1 |
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| ID | 5712741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1662856 |
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| End bp | 1663923 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641267512 |
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| Product | spermidine/putrescine import ATP-binding protein |
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| Protein accession | YP_001532940 |
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| Protein GI | 159044146 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0206589 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.828633 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGCAC CCCTGATCCG CATCCAGAAC GTCCAGAAAT ACTACGGCAG CTATCACGCT
CTGCGAGATG TCTCGGTCGA TATCGGCGCG GGGGAGTTTT TTTCACTGCT GGGCCCGTCC
GGCTGCGGAA AGACGACCCT GTTGCGCACC ATCGCCGGTT TCGAGGAATT CGAGAGTGGC
ACACTCACCC TCGGCGGCGT GGACATGGTG GGGGTGCCCG CCAACAAGCG GCCCACCAAC
ATGGTGTTCC AAAGTTATGC GATTTTCCCG CATCTCAGCG TCGGCGACAA CGTGGGCTTC
GGCTTGAGGC GACGCACCGA CCTGACCGGG GAGGCGCGCG CCAGTCTCGT CGCCGACGCC
CTGCACATGG TGGGTTTGAA GGGCTATGGC GCGCGCGCGG CCCATGCACT CTCCGGTGGG
CAACGGCAGC GTGTGGCGCT CGCGCGGGCG CTGGTGCTGA AACCCAAGGT CCTGCTGCTG
GACGAACCGC TATCGGCCCT CGACAAGAAG ATGCGCGAGC AGATGCAGAC CGAGCTGCGG
CGGCTGCAGC GCCATGTCGG CATCACCTTC ATCCTGGTGA CCCACGACCA GGAGGAAGCC
TTGACCATGT CGGACCGGAT CGCGGTGATG TTCGAGGGAC GCATCGCGCA GCTCGCCCCC
CCCCAGACGC TTTATGCGCA ACCCGCAAGC CGGGCGGTGG CCGAATTCAT CGGTACGATG
TCCTTCCTGC CCGCGGAGAT CAGCGGCGAT CGGGCTGATG TCGCCGGTCT CGGCACGGTG
CCGGTGACGG CGGATCAATG TGCTGAGGGC GCCACGGGGA CCTGCGTGGC GGGCGTGCGC
CCCGAAGGCA TGGCGCTCGA TTTCGACGAG ACCGGGCAGG GCACCCCGGG CGAGGTCGTC
GAGCGGGAGT ATTTCGGGGA CATGACCAGC TACCATGTCC GCCTCGACGG GACCGATCGC
CTGGTTGAGA TCGCCATGAA GAACGGGCCC GGCATTCCCG TGCTCGATCC CGGCGCGCGC
ACCCGGGTCC AATGGTCGCC CGAGGCACTG CGCTATTTCG CAGCCTGA
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| Protein sequence | MTAPLIRIQN VQKYYGSYHA LRDVSVDIGA GEFFSLLGPS GCGKTTLLRT IAGFEEFESG
TLTLGGVDMV GVPANKRPTN MVFQSYAIFP HLSVGDNVGF GLRRRTDLTG EARASLVADA
LHMVGLKGYG ARAAHALSGG QRQRVALARA LVLKPKVLLL DEPLSALDKK MREQMQTELR
RLQRHVGITF ILVTHDQEEA LTMSDRIAVM FEGRIAQLAP PQTLYAQPAS RAVAEFIGTM
SFLPAEISGD RADVAGLGTV PVTADQCAEG ATGTCVAGVR PEGMALDFDE TGQGTPGEVV
EREYFGDMTS YHVRLDGTDR LVEIAMKNGP GIPVLDPGAR TRVQWSPEAL RYFAA
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