Gene Dshi_1596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1596 
Symbol 
ID5712740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand+ 
Start bp1662224 
End bp1662841 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content64% 
IMG OID641267511 
Producthypothetical protein 
Protein accessionYP_001532939 
Protein GI159044145 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0318645 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.570188 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAAAC GCGGCTATCA CCATGGCAAT TTGCGTGCGG CGCTCGTCGA TGCCGCCCTC 
AAGCTGATCG AGGAGAAGGG GCCGACCGGA TTCACCCTGT CCGAGGCAGC CAAGAATGCC 
GGCGTGACCC CGGCAGCGGT CTATCGCCAT TTCTCCGGCC GGGACGAGTT GATCATCGAA 
ATCGCCGTGC AAGGGCATTC CATTTTCGCG GACCTTATGG AGTATGCGTT CAACGCCGGA 
CAGCCCTCGG CGTTGGCGGC CTTCGAGGCG ACGGGTCGGG CCTATCTCGC TTTTGCACGC 
AAGCATCCCG GGCACTACAT GGCGATGTTC GAGAGCGGGA TTTCGAACCA GGCAACACCG 
GAGCTGGCCA CCGCCTCGGC CCGGTCTCGG CAGGTTCTGG AGCGCGCGGC GGAGGAACTG 
TCCAAGCATA TCCCCGAGGA CAAGCGCCCG CCGGCTTCGA TGTTCTCGGC GCATATCTGG 
GCCATGAGCC ACGGGGTTGT GGAACTTTTC GCCCGTGGCG CGCCGGGGTC CAAAGCCCCT 
TTCCCGCCAG AGGATCTTCT GGAAACCGGG ATCGGGATCT ACTTGCGCGG GCTGGGACTG 
ATCGCGCCGG ACGACTGA
 
Protein sequence
MPKRGYHHGN LRAALVDAAL KLIEEKGPTG FTLSEAAKNA GVTPAAVYRH FSGRDELIIE 
IAVQGHSIFA DLMEYAFNAG QPSALAAFEA TGRAYLAFAR KHPGHYMAMF ESGISNQATP 
ELATASARSR QVLERAAEEL SKHIPEDKRP PASMFSAHIW AMSHGVVELF ARGAPGSKAP 
FPPEDLLETG IGIYLRGLGL IAPDD