Gene Dshi_1592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1592 
Symbol 
ID5712736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1658518 
End bp1659390 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content63% 
IMG OID641267507 
Producthypothetical protein 
Protein accessionYP_001532935 
Protein GI159044141 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.466935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.17451 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTATG ACACGCCCGC TGCCTGGGCC TCCGCGCCGG AAAAACACGT TTTGTTGTTC 
GGCATGTCCG GTCTTGGCAA GACTTTCGTG TCCAACCGGC TGCGCGAGTC CGGAAACTGG
TTCCATTACT CCGTCGATTA CCGGATCGGC ACCCGGTATA TGGGCGAGCA CATCGTGGAC
AATTTCAAGC GCGAGGCCAT GCAGGTGCCC TTCCTGCGGG ACCTGCTGAT GTCGGATTCG
ATCTATATCG GGTCCAACAT CACGCTGGAG AACCTCTCAC CGGTCTCCAC CTATCTCGGC
AAGCCCGGCA ATCCCGCGCT GGGAGGGGTG CCGATCGACG AATACCGCCT CAGGCAGGCG
CAATTCCGGC GCGCCGAGAT CGCCGCGTTG CAGGACACCG CACATTTCAT CGACCGCGCC
AAGGCACTCT ATGGCTATCC ACATTTCGTG TGCGACAGCG GCGGGTCGAT CTGCGAATGG
GTGGACGCCG AGGACCCCGA GGATCCACTG CTGCGCGATC TGTCGGCTGT GACGCTGCTG
GTCTGGATCA AGGGCGACGC GGCCCATACC GAGGAACTGA TCCGCCGTTT CGACCGGGAC
CCGAAGCCGA TGGCCTACCA ACCGGAGTTC CTCGACCGGG TGTGGGCGGA GTATCTGGCC
CAGAACCGTA TGGCCCCCGA GGCGGTAGAC CCGGACGCCT TCATCCGCTG GACCTATGCC
CAGGCGCTCG CGCACCGTCA GCCGCGCTAT GCGGCCATGG CGCAGAACTG GGGCGTCACG
GTGGAAGCCG ATGATATCGC CCGGATGCGC GATGCCGCGG ATTTCGAGGC ACTGATCGCG
GACGCCCTTG GCAATCGGAG CTCAAGCGCC TAA
 
Protein sequence
MLYDTPAAWA SAPEKHVLLF GMSGLGKTFV SNRLRESGNW FHYSVDYRIG TRYMGEHIVD 
NFKREAMQVP FLRDLLMSDS IYIGSNITLE NLSPVSTYLG KPGNPALGGV PIDEYRLRQA
QFRRAEIAAL QDTAHFIDRA KALYGYPHFV CDSGGSICEW VDAEDPEDPL LRDLSAVTLL
VWIKGDAAHT EELIRRFDRD PKPMAYQPEF LDRVWAEYLA QNRMAPEAVD PDAFIRWTYA
QALAHRQPRY AAMAQNWGVT VEADDIARMR DAADFEALIA DALGNRSSSA