| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1589 |
|---|
| Symbol | |
|---|
| ID | 5712733 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 1655376 |
|---|
| End bp | 1656263 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641267504 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001532932 |
|---|
| Protein GI | 159044138 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.0342218 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCGC GCAACGAACC GGTCAAGGCG GCCCTTTGGA TGACCGGGGC CATCGGGTCC
TTCATCCTGA TGGCTGTCTC GGGACGCGCC TTATCCACAA CCCACGACAC GTTCGAGATC
ATGTTCTTCC GGTCGCTGAT CGGGATCTGC CTGGTGCTGG TCATCGCGGG CGCGTTCGGG
CGGTTGGGCG AGGTCACCAC CCGGAGCCTC GGCCTGCACG GCATTCGCAA CCTGTGCCAT
TTCACGGGCC AGAACCTGTG GTTCTTCGCC CTGCCCCTGA TCCCTCTGGC GCAGCTTTTC
GCGCTGGAGT TCACCACACC GCTCTGGGTG ACGCTTCTGG CGCCGCTGAT CCTGGGCGAG
CGGCTGACGC GCAGCCGCAT GCTGGCGGCG GCCATCGGGT TCAGTGGCGT GCTGATCGTC
GCGCAACCCG ATGTGACGGG CATCAGCCTC GGGGTGATCT GCGCGGCGCT CTCGGCTCTG
GGCTTTGCCG GGTCCGCCAT GTTCACCAAG AAGCTCACGC GCACCGAGAC TACGGTCTGC
ATCCTGTTCT GGTTGACGGT GATGCAGAGC GGCTTTGGAC TGGTGGCGGT ATTCCATGAC
GGACAGGTCA CCTGGCCGAG CCTCACCACC CTGCCCTGGC TGTGCCTTGT GGCGCTGTGC
GGGTTGGTGG CGCATTTCTG CCTGACAACG GCACTAAGCA TCGCCCCCGC CGTGATCGTG
ATGCCCTTCG ATTTCCTGCG GCTTCCGCTC ATCGGCATCG TCGGGTTCAT GTTCTACAAC
GAGGCCCTGG GGCTGGGCCT CATCCTGGGT GCGGCCCTCA TTATCGGCGC AAATGCCATA
AATATCTGGG TCGAGCGCCC CAAACCGCGT CCTGACGCCG CGTTATAG
|
|---|
| Protein sequence | MTPRNEPVKA ALWMTGAIGS FILMAVSGRA LSTTHDTFEI MFFRSLIGIC LVLVIAGAFG
RLGEVTTRSL GLHGIRNLCH FTGQNLWFFA LPLIPLAQLF ALEFTTPLWV TLLAPLILGE
RLTRSRMLAA AIGFSGVLIV AQPDVTGISL GVICAALSAL GFAGSAMFTK KLTRTETTVC
ILFWLTVMQS GFGLVAVFHD GQVTWPSLTT LPWLCLVALC GLVAHFCLTT ALSIAPAVIV
MPFDFLRLPL IGIVGFMFYN EALGLGLILG AALIIGANAI NIWVERPKPR PDAAL
|
|---|
| |