Gene Dshi_1584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1584 
Symbol 
ID5712728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1649803 
End bp1650927 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content64% 
IMG OID641267499 
Producthypothetical protein 
Protein accessionYP_001532927 
Protein GI159044133 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.16808 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0492806 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAGCT TTTCTTCCGC CCCAAACACG CTCATGGACC TGCCAGATTG GGTCCCCACA 
CATGCCCGTC ACTACCTGGC CCATACGGAA CTGGGTCTGT CGATCCGGTC CGTTGCCCGG
GAAGCGGGCT GTGCGGCCTC AACCGTGCTG CGCCAGATCC GCAAACTCGA AACCGAACGG
GACGACCCCC TGATTGACGA AGCGCTCGAC ACCTTGCGTG CGCATTTCAC CCCTTCCTCT
CCAGCAGAAC AGGACGTCAT CCCCATGAGC GCCCATCCCC GCATGCTTCT GAAGACCGAG
ACCGCGAAAA TCGAGCGGGA GGCACGCCGC ATCCTGCGTC GGCTGTGCGA AAGCGATGCC
GTGCTGGCGG TTTCACCGGA AATGGAAAAG GCCGTCGTGC TGCGGATGAC CGATGGCATT
CCGCGCCGGA TTGCCGTGGT CGACCGCGGG ATCGCGCAAG CCTTCGCGCT GCAGGATTGG
GTCAAGTGCC GCAGCGCGGG CAAGGTGGCG CAATACGAGA TCACCCATGC CGGGCGTCTG
GCGCTGAAAC GTCTTCTGGC GGATGACGCC AAGCGCAAGA GTGGGCTGGA CACACCGGAG
GTTGCGGCCT TCGCGGAACA GCATCGCGAC TGGGGCGAGC GGCAGGTCGT CGCGAGCGAC
ACCGGCGAGA CCGCCCGCCT GCGCTACAAC CTGGCCGAAT CGCCCATGCT CAGCCTTGCC
CGGCGTCGGG ACAAGGATGG TACGCCGTTT TTGACCGATG AGATGGTTTC TGCGGGTGAA
CGGTTGCGCG AGGACTTCGA ATTGGCGCAA ATGGGTCCGC GAACAACTCA GAACTGGGAG
AAGTTCTTGA CCACGTCCGA CCGCAGCAGC TTCCAGCCGG GCTCCGATCA CGGCGGTGGG
TCTGGTCAGG CCAAGGATCG CGTGCACGCG GCCTTGCAGG AGCTTGGACC GGGGCTGGGC
GATGTAGTGC TGCGATGCTG CTGCTTTCTC GAAGGCCTTG AAGCCGCCGA GAAGCGCATG
GGTTGGTCCG CGCGCTCGGG CAAGATCGTC CTGCGGATCG CCTTGCAACG GCTGTCCGAA
TACTACAAGC GTGTACACGG TCAGGGCGGC GGCCTGATCG GCTGA
 
Protein sequence
MSSFSSAPNT LMDLPDWVPT HARHYLAHTE LGLSIRSVAR EAGCAASTVL RQIRKLETER 
DDPLIDEALD TLRAHFTPSS PAEQDVIPMS AHPRMLLKTE TAKIEREARR ILRRLCESDA
VLAVSPEMEK AVVLRMTDGI PRRIAVVDRG IAQAFALQDW VKCRSAGKVA QYEITHAGRL
ALKRLLADDA KRKSGLDTPE VAAFAEQHRD WGERQVVASD TGETARLRYN LAESPMLSLA
RRRDKDGTPF LTDEMVSAGE RLREDFELAQ MGPRTTQNWE KFLTTSDRSS FQPGSDHGGG
SGQAKDRVHA ALQELGPGLG DVVLRCCCFL EGLEAAEKRM GWSARSGKIV LRIALQRLSE
YYKRVHGQGG GLIG