Gene Dshi_1578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1578 
Symbol 
ID5712722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1645739 
End bp1646227 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content71% 
IMG OID641267493 
Productputative phosphatidylglycerophosphatase A 
Protein accessionYP_001532921 
Protein GI159044127 
COG category[I] Lipid transport and metabolism 
COG ID[COG1267] Phosphatidylglycerophosphatase A and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0267471 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGGG CGATTGCCAC AGTCTTCGGG GTCGGATTGC TGCGCCCCGC GCCGGGGACC 
TGGGGGTCGC TGGCCGCCCT GCCCCTGGCC TGGGCGCTGC ATGTGCTGGG CGGGTTCACC
CTGCTGGCGC TGGCAAGCGT TGCGGTGTTC TTCGTCGGCT GGTGGGCCAC GAGGGCCGCG
ACCGCGGGCG CGGAGGACCA CGACCCTTCG GAGATCGTGA TCGACGAGGT GGCGGGCCAG
TGGATCGCAC TTTGGCCGGT ATCCTACGGG GCGCAGTTCG CCGGGGTCGA CATGCTGGCG
CTCTGGCCCG GCTGGATCGC GGCCTTCGCG CTGTTCCGGC TGTTCGACAT CTGGAAACCG
GGTCCCGTGG GCTGGGCCGA CCGCCGCCAT GACGCCTGGG GCGTGATGCT GGACGATGTG
GTGGCCGGGG TGATGGCCGC GCTCTGCGTC GCCCTGTTGG CCGCGCTTGC CCATGGGGTG
CTGATATGA
 
Protein sequence
MSRAIATVFG VGLLRPAPGT WGSLAALPLA WALHVLGGFT LLALASVAVF FVGWWATRAA 
TAGAEDHDPS EIVIDEVAGQ WIALWPVSYG AQFAGVDMLA LWPGWIAAFA LFRLFDIWKP
GPVGWADRRH DAWGVMLDDV VAGVMAALCV ALLAALAHGV LI