Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1578 |
Symbol | |
ID | 5712722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 1645739 |
End bp | 1646227 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641267493 |
Product | putative phosphatidylglycerophosphatase A |
Protein accession | YP_001532921 |
Protein GI | 159044127 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1267] Phosphatidylglycerophosphatase A and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.0267471 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGGG CGATTGCCAC AGTCTTCGGG GTCGGATTGC TGCGCCCCGC GCCGGGGACC TGGGGGTCGC TGGCCGCCCT GCCCCTGGCC TGGGCGCTGC ATGTGCTGGG CGGGTTCACC CTGCTGGCGC TGGCAAGCGT TGCGGTGTTC TTCGTCGGCT GGTGGGCCAC GAGGGCCGCG ACCGCGGGCG CGGAGGACCA CGACCCTTCG GAGATCGTGA TCGACGAGGT GGCGGGCCAG TGGATCGCAC TTTGGCCGGT ATCCTACGGG GCGCAGTTCG CCGGGGTCGA CATGCTGGCG CTCTGGCCCG GCTGGATCGC GGCCTTCGCG CTGTTCCGGC TGTTCGACAT CTGGAAACCG GGTCCCGTGG GCTGGGCCGA CCGCCGCCAT GACGCCTGGG GCGTGATGCT GGACGATGTG GTGGCCGGGG TGATGGCCGC GCTCTGCGTC GCCCTGTTGG CCGCGCTTGC CCATGGGGTG CTGATATGA
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Protein sequence | MSRAIATVFG VGLLRPAPGT WGSLAALPLA WALHVLGGFT LLALASVAVF FVGWWATRAA TAGAEDHDPS EIVIDEVAGQ WIALWPVSYG AQFAGVDMLA LWPGWIAAFA LFRLFDIWKP GPVGWADRRH DAWGVMLDDV VAGVMAALCV ALLAALAHGV LI
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