Gene Dshi_1566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1566 
SymbolhflX 
ID5712710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1631386 
End bp1632633 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content67% 
IMG OID641267481 
ProductGTP-binding protein 
Protein accessionYP_001532909 
Protein GI159044115 
COG category[R] General function prediction only 
COG ID[COG2262] GTPases 
TIGRFAM ID[TIGR03156] GTP-binding protein HflX 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0517889 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0486132 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGCACC CCGAACTGAC CGCCGACCGC GGCCGCCGCC TTGCGGGCCC TGCGCTCGAA 
GAAGCCGTGG CTTTGGCCGC TGCCCTGCCG CGTCTCGACG TGGCCGGGGC CGATATCGTG
CGCCTGTCCA AGGTGCAGCC GGGCCTGTTG TTCGGCTCCG GCAAGATCGA GGAATTGCGC
GCCCGGATCG AGGCCGACGA GATCGGCCTC GTGCTGATCG ACGGCCCCGT CAGCCCGGTC
CAGCAGCGCA ATCTCGAACG GGCCTGGAAG ACCAAGATCC TCGACAGCAC CGGCCTGATC
CTCGAGATCT TCGCCGACCG CGCCCGCACT CGCGAAGGCG TGTTGCAGGT CGAACTGGCC
GCACTGGCCT ATCAACGCAC GCGTCTCGTA CGCTCCTGGA CCCACCTGGA ACGCCAGCGC
GGCGGGCTCG GTTTCGTCGG CGGCCCCGGC GAGACCCAGA TCGAGGCGGA CCGCCGCGCC
ATCGACGAGG CGGTCACACG CATCAAACGC CAGCTCGCCA AGGTGGTGAA AACGCGCGAG
CTGCACCGCG CCGCGCGCAA GAAAGTACCA TACCCAATCG TCGCGCTCGT GGGCTACACC
AACGCCGGAA AATCGACCCT GTTCAACCAC TTGACCGGGG CGGAGGTGCT GGCCAAGGAC
ATGCTCTTCG CCACGCTCGA CCCGACCATG CGGGCCTTGA AATTGCCCGA CGGGCTGGAG
GTGATCCTGT CCGACACTGT GGGCTTCATC TCAAGCCTGC CCACGGAACT GGTCGCGGCA
TTCCGCGCCA CACTCGAGGA AGTGCTGGAT GCCGACCTGA TCCTGCATGT CCGCGATATC
GCCCATCCCG ACAGCGCCGC ACAGGCTGAG GATGTCCACA AGATCCTCGA GGCTCTCGGC
GTCAAGGACG AGCGCCCGAT GATCGAGGTC TGGAACAAGC TGGACCTGCT GCCCGAGGCC
GAAGCCGAGG CCCTGCGCAC CAGTGCCGCC CGCCAGGACG ACGTGCTGGC GATCTCGGCG
CTCAGTGGCG AGGGGTTCGA CACCCTGCAG GCGGCGATCT CCGCCCGGCT GACACCCGCG
CTGCTGGACG AAGTGGTCGT CGTGCCCTTC GCCCAGGGCC GCGTCCGCGC GTGGTTGTTC
GAACAGGGTG TCGTTCTGGA CGAAAGCCAG GATGAGGACG GCTACCACCT CTCCCTGCGC
TGGTCGCCCG TGCAGAAGGC AAGGTTCGAA GCGCTCCTGC ACGCCTGA
 
Protein sequence
MLHPELTADR GRRLAGPALE EAVALAAALP RLDVAGADIV RLSKVQPGLL FGSGKIEELR 
ARIEADEIGL VLIDGPVSPV QQRNLERAWK TKILDSTGLI LEIFADRART REGVLQVELA
ALAYQRTRLV RSWTHLERQR GGLGFVGGPG ETQIEADRRA IDEAVTRIKR QLAKVVKTRE
LHRAARKKVP YPIVALVGYT NAGKSTLFNH LTGAEVLAKD MLFATLDPTM RALKLPDGLE
VILSDTVGFI SSLPTELVAA FRATLEEVLD ADLILHVRDI AHPDSAAQAE DVHKILEALG
VKDERPMIEV WNKLDLLPEA EAEALRTSAA RQDDVLAISA LSGEGFDTLQ AAISARLTPA
LLDEVVVVPF AQGRVRAWLF EQGVVLDESQ DEDGYHLSLR WSPVQKARFE ALLHA