Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1566 |
Symbol | hflX |
ID | 5712710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 1631386 |
End bp | 1632633 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641267481 |
Product | GTP-binding protein |
Protein accession | YP_001532909 |
Protein GI | 159044115 |
COG category | [R] General function prediction only |
COG ID | [COG2262] GTPases |
TIGRFAM ID | [TIGR03156] GTP-binding protein HflX |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0517889 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.0486132 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGCACC CCGAACTGAC CGCCGACCGC GGCCGCCGCC TTGCGGGCCC TGCGCTCGAA GAAGCCGTGG CTTTGGCCGC TGCCCTGCCG CGTCTCGACG TGGCCGGGGC CGATATCGTG CGCCTGTCCA AGGTGCAGCC GGGCCTGTTG TTCGGCTCCG GCAAGATCGA GGAATTGCGC GCCCGGATCG AGGCCGACGA GATCGGCCTC GTGCTGATCG ACGGCCCCGT CAGCCCGGTC CAGCAGCGCA ATCTCGAACG GGCCTGGAAG ACCAAGATCC TCGACAGCAC CGGCCTGATC CTCGAGATCT TCGCCGACCG CGCCCGCACT CGCGAAGGCG TGTTGCAGGT CGAACTGGCC GCACTGGCCT ATCAACGCAC GCGTCTCGTA CGCTCCTGGA CCCACCTGGA ACGCCAGCGC GGCGGGCTCG GTTTCGTCGG CGGCCCCGGC GAGACCCAGA TCGAGGCGGA CCGCCGCGCC ATCGACGAGG CGGTCACACG CATCAAACGC CAGCTCGCCA AGGTGGTGAA AACGCGCGAG CTGCACCGCG CCGCGCGCAA GAAAGTACCA TACCCAATCG TCGCGCTCGT GGGCTACACC AACGCCGGAA AATCGACCCT GTTCAACCAC TTGACCGGGG CGGAGGTGCT GGCCAAGGAC ATGCTCTTCG CCACGCTCGA CCCGACCATG CGGGCCTTGA AATTGCCCGA CGGGCTGGAG GTGATCCTGT CCGACACTGT GGGCTTCATC TCAAGCCTGC CCACGGAACT GGTCGCGGCA TTCCGCGCCA CACTCGAGGA AGTGCTGGAT GCCGACCTGA TCCTGCATGT CCGCGATATC GCCCATCCCG ACAGCGCCGC ACAGGCTGAG GATGTCCACA AGATCCTCGA GGCTCTCGGC GTCAAGGACG AGCGCCCGAT GATCGAGGTC TGGAACAAGC TGGACCTGCT GCCCGAGGCC GAAGCCGAGG CCCTGCGCAC CAGTGCCGCC CGCCAGGACG ACGTGCTGGC GATCTCGGCG CTCAGTGGCG AGGGGTTCGA CACCCTGCAG GCGGCGATCT CCGCCCGGCT GACACCCGCG CTGCTGGACG AAGTGGTCGT CGTGCCCTTC GCCCAGGGCC GCGTCCGCGC GTGGTTGTTC GAACAGGGTG TCGTTCTGGA CGAAAGCCAG GATGAGGACG GCTACCACCT CTCCCTGCGC TGGTCGCCCG TGCAGAAGGC AAGGTTCGAA GCGCTCCTGC ACGCCTGA
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Protein sequence | MLHPELTADR GRRLAGPALE EAVALAAALP RLDVAGADIV RLSKVQPGLL FGSGKIEELR ARIEADEIGL VLIDGPVSPV QQRNLERAWK TKILDSTGLI LEIFADRART REGVLQVELA ALAYQRTRLV RSWTHLERQR GGLGFVGGPG ETQIEADRRA IDEAVTRIKR QLAKVVKTRE LHRAARKKVP YPIVALVGYT NAGKSTLFNH LTGAEVLAKD MLFATLDPTM RALKLPDGLE VILSDTVGFI SSLPTELVAA FRATLEEVLD ADLILHVRDI AHPDSAAQAE DVHKILEALG VKDERPMIEV WNKLDLLPEA EAEALRTSAA RQDDVLAISA LSGEGFDTLQ AAISARLTPA LLDEVVVVPF AQGRVRAWLF EQGVVLDESQ DEDGYHLSLR WSPVQKARFE ALLHA
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