| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1546 |
|---|
| Symbol | |
|---|
| ID | 5713203 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | - |
|---|
| Start bp | 1608891 |
|---|
| End bp | 1609703 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641267461 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001532889 |
|---|
| Protein GI | 159044095 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2928] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.172364 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAGCG GGCGGCTTTC CGGGCCTGCA GCGGTCTGCC TGCGCTTGTG TGCCGCCGCA
CACCTGCCTA GATACAAGGC GACCGCAGCC CGAGACCAAC CAGCCTTGAA ACTAGACCCC
GACCTTCCCC CGCCCGCGAA ACGAGGCCTG TTCGCCCGCG TGCGCGCGAA TTTCCTTACC
GGCCTGATCG TGATTCTGCC GATCGCGGTG ACCATCTGGC TCGTCTGGTC GGTGATCGGG
ATCATCGACG GCTGGGTCTT GCCCTTCGTG CCCGAACGCT ACAACCCGGT GGTTCTGATC
AAGCAGCACT TCGACGTCAC CGTGGATATT CGCGGTGTGG GCGTGGTGTT CTTCCTGATG
TTCACGCTGA TCGTGGGCTG GCTGGCCAAG GGGCTGCTGG GGCGGTCGAT CATCCGCTGG
ACCGAAGGGG TGGTCACGCA GATGCCCGTT GTCCGGTCGG TCTATGGCGG GATGAAGCAG
ATCGCGGAGA CGGTGCTGGC CTCGGGCAGC ACGTCCTTCG ACAAGGCCTG CCTGGTGGAG
TATCCGCGGC GCAACATCTG GGCGATTGCC TTCATCTCGA CCAATGCCAA GGGGGAGATC
GCGGCCAAGG GCGATGACGA GATGATCTCG GTCTTCCTGC CGACCACGCC GAACCCGACC
TCGGGGTTCT TGCTGTTCGT GCCGAAACGG GACGTGAAGG TTCTGGACAT GACGGTGGAG
GATGCGGCCA AGCTGGTGAT CTCGGCGGGC CTGGTCTATC CGGACACGGA CCCCAAGAAG
GTGCGCGAGC AGGCCTGGAT CAAGTCGATC TGA
|
|---|
| Protein sequence | MRSGRLSGPA AVCLRLCAAA HLPRYKATAA RDQPALKLDP DLPPPAKRGL FARVRANFLT
GLIVILPIAV TIWLVWSVIG IIDGWVLPFV PERYNPVVLI KQHFDVTVDI RGVGVVFFLM
FTLIVGWLAK GLLGRSIIRW TEGVVTQMPV VRSVYGGMKQ IAETVLASGS TSFDKACLVE
YPRRNIWAIA FISTNAKGEI AAKGDDEMIS VFLPTTPNPT SGFLLFVPKR DVKVLDMTVE
DAAKLVISAG LVYPDTDPKK VREQAWIKSI
|
|---|
| |