| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1539 |
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| Symbol | |
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| ID | 5713196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1599990 |
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| End bp | 1600946 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641267454 |
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| Product | inner membrane protein |
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| Protein accession | YP_001532882 |
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| Protein GI | 159044088 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0530] Ca2+/Na+ antiporter |
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| TIGRFAM ID | [TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.544691 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.292097 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAAGCAG TTCTCTTGAT CCTCGCCGGC CTTGCCGGGC TGGTGCTCGG CGGCGAGTGG
CTCGTGCGCG GCGCGGTCTC GGCCGCGCGC AGCTTCGGGC TCTCTCCGCT CGTGATCGGG
CTGACACTGG TGGGTTTCGG CACCTCGGCG CCGGAGCTGG CCACCAGCCT GCAGGCCGCC
CTTTCCGGCT CCCCCGGACT TGCCATCGGC AACGTGGTCG GCAGCAATAT CGGCAACATC
CTCCTGATCC TCGGCATCGC GGCGCTGCTG GCCCCGGTCG CCGTCAGCCC GGCCGCCCTG
CGGCGCGACG GCGGGGTGAT GGGTCTGGCC ACGCTGCTCT GCCTCGGCGC GGTGCTGTGG
GGCGAGATCG GTCGCGGGGT CGGCGCGGGT CTGGTGGCCG CCTTGCTGGC CTATCTCGGC
TTCACCCTGT GGTCCGAAAA ACGCGCAGGC GGCACCGAGG CGGCGGCGGT CTATGCCGAC
GAGGCCGCGC TGGTGCCCCG CTCCGGACGA GGGCGCGCGG CTGCACTCGG GCTGGCGCTC
GTCGGTCTCG CGGTCATCCT TCTGGGCGCG CGTCTGCTGG TCTCCGGCGC GGTCATCATC
GCTCGCGACC TCGGCATGAG CGAGACCGTG ATCGGCCTGA CCATCGTCGC CATCGGCACC
TCCCTGCCCG AGCTCGTCAC CGCGGTGGTC GCCGTGCGCA AGGGGCAGGG GGACGTGGCG
GTCGGCAACG TGATCGGCAG CAATATCTTC AACATCCTCG GCATCCTCGG GGTCACCGCC
CTGGTGCAGC CGATGCCGAT CCCGCCCGAG ATACTGCGCC TCGACATCTG GGTGATGTGC
GGCGCGACGC TGCTGCTGTT TGCCTTCGCC CGCACCGGCT GGACGGTCAG CCGCCGCGAG
GGCGCGGTGT TCTTGGCCTG CTACGCGGTC TATCTCGGCG TGTTGCTGGC GGGCTGA
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| Protein sequence | MEAVLLILAG LAGLVLGGEW LVRGAVSAAR SFGLSPLVIG LTLVGFGTSA PELATSLQAA
LSGSPGLAIG NVVGSNIGNI LLILGIAALL APVAVSPAAL RRDGGVMGLA TLLCLGAVLW
GEIGRGVGAG LVAALLAYLG FTLWSEKRAG GTEAAAVYAD EAALVPRSGR GRAAALGLAL
VGLAVILLGA RLLVSGAVII ARDLGMSETV IGLTIVAIGT SLPELVTAVV AVRKGQGDVA
VGNVIGSNIF NILGILGVTA LVQPMPIPPE ILRLDIWVMC GATLLLFAFA RTGWTVSRRE
GAVFLACYAV YLGVLLAG
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