| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1533 |
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| Symbol | |
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| ID | 5713190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1593702 |
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| End bp | 1594727 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641267448 |
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| Product | periplasmic binding protein |
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| Protein accession | YP_001532876 |
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| Protein GI | 159044082 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0226] ABC-type phosphate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.74194 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTCTG TCAAACTCGC AGCAACCGTC GCCGCCGCCG CGCTTGTCGC CGCGTCCGCC
GCCGCCGCCC GCGACCAGGT CCAGGTGGCC GGGTCCTCTA CCGTGCTGCC CTATGCCGCC
ATCGTCGCCG AAGCCTTCGG CGAAAACTTC GACTTCCCGA CCCCGGTCGT GGAATCCGGA
GGCTCTTCGG CGGGGCTCAA GCGGTTCTGC GAAGGCGTGG GCGAGAACAC CCTCGACATC
GCCAATGCCT CCCGGCAGAT CCGCGACGCC GAGGTCGCCG TCTGCGCCGA AAACGGCGTG
ACCGAGATCA TCGAAGTCCG CATCGGCTAT GACGGCATCG TCTTTGCCTC TGACATCAAC
GGCCCGTCCT TCGCCTTCAC CCCCGAAGAC TGGTACAAGG CGCTCGCCGC CGAGCATTTC
ATCGACGGCG AACTGGTCGC CAACAGCCTC GAGACGTGGG ACCAGGTCAA CCCCGACTTC
CCCGCCCAGC CGATCCAGGC CTTCGTGCCC GGCACCAAGC ACGGCACCCG CGAAGTGTTC
GAGGAAAAGG TGATCCTGCA GGGCTGCCAG GATGGCGGCT TCTTCCAGGC GATGTTGGAT
GCGGGCGTCG ATGAGGACAC CGCCGAAGAG AAGTGCATGT CCCTGCGCAC CGATGGCCGC
TCCGTCGATA TCGACGGCGA TTATACCGAG ACCCTGGCAC GCATCGCCAG CGACACCAAC
GGTATCGGCG TGTTCGGCCT GGCGTTCTAC GAGAACAACA CCGACAAGCT GCAGGTCGCG
ACCATGAACG GCGTCGTGCC CACCACCGAG GCCATCGCCG CCGGCGATTA CCCGGTGTCG
CGCCCGTTGT TTTTCTACAT CAAGAAGGCG CATATCGGCG TGATCCCGGG CCTGCAGGAA
TTCGCGGAGT TCTTCGTTGC CGACGAGATT GCCGGCCCCG ACGGCCCGCT GGCCGCCTAT
GGCCTCGTCT CGGACCCGGC CCTGGGCGAA ACGCAGACGC TCGTGGCCTC CGGCCAGTCC
ATGTAA
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| Protein sequence | MHSVKLAATV AAAALVAASA AAARDQVQVA GSSTVLPYAA IVAEAFGENF DFPTPVVESG
GSSAGLKRFC EGVGENTLDI ANASRQIRDA EVAVCAENGV TEIIEVRIGY DGIVFASDIN
GPSFAFTPED WYKALAAEHF IDGELVANSL ETWDQVNPDF PAQPIQAFVP GTKHGTREVF
EEKVILQGCQ DGGFFQAMLD AGVDEDTAEE KCMSLRTDGR SVDIDGDYTE TLARIASDTN
GIGVFGLAFY ENNTDKLQVA TMNGVVPTTE AIAAGDYPVS RPLFFYIKKA HIGVIPGLQE
FAEFFVADEI AGPDGPLAAY GLVSDPALGE TQTLVASGQS M
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