Gene Dshi_1530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1530 
Symbol 
ID5713187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1591275 
End bp1591799 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content66% 
IMG OID641267445 
Productgamma-class carbonic anhydrase family protein 
Protein accessionYP_001532873 
Protein GI159044079 
COG category[R] General function prediction only 
COG ID[COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.256343 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTATG CCCTCGACGG CATCGCCCCG CAATTCCCCG CCTCCGGCAA CTACTGGGTC 
GCGCCGGACG CCAATCTGAT CGGCAAGGTC GTTCTGGAAG AGGCCAGCTC CGTGTGGTTC
GGCGCCACCC TGCGCGGCGA CAACGAGGAA ATTCGCCTCG GGACCGGCTC CAATATCCAG
GAAGCCTGCG TATTGCACAC GGACATGGGC TTCCCCCTCA CGATCGGGAC GAACTGCACC
ATCGGGCACA AGGCGATCCT CCACGGCTGC ACCATCGGCG ATGGCAGCCT GGTCGGCATG
GGCGCCACGA TCCTGAACGG CGCCCGCATC GGCAAGGGCT GTCTGATCGG TGCGGGCGCG
CTGGTGACCG AAAGCAAGGA GATCCCGGAC TTCTCCCTCG TGATGGGCGC ACCGGGCAAA
GTGGTGCGCA CCCTCGATGA GACGGCGCAG GCCGGGCTGC TGGAATCGGC CACCGGCTAC
CAGGCCAACA TGCGCCGCTT CCGGGCGGGC TTGACCGCGC TCTGA
 
Protein sequence
MIYALDGIAP QFPASGNYWV APDANLIGKV VLEEASSVWF GATLRGDNEE IRLGTGSNIQ 
EACVLHTDMG FPLTIGTNCT IGHKAILHGC TIGDGSLVGM GATILNGARI GKGCLIGAGA
LVTESKEIPD FSLVMGAPGK VVRTLDETAQ AGLLESATGY QANMRRFRAG LTAL