| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1520 |
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| Symbol | livF2 |
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| ID | 5713177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1581242 |
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| End bp | 1582075 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641267435 |
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| Product | high-affinity branched-chain amino acid transport ATP-binding protein |
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| Protein accession | YP_001532863 |
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| Protein GI | 159044069 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.235414 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCGC AGAACCCTTA CCAGGAGGCG CGCGGGAACA AGGACGCGTC GATCACCAAC
CCGCGCCCCG GCGGCACGCT GACCCCCGGC ACAGCGCCCG AGGGACGCAG CGCTGCCCAT
CCGGGCGAGC CCTTCCTGAT CGGCGACGGG ATGACCGGCG GCTATGGCAG CGGCGCGGAT
ATCCTGCATG ACTGCACCCT CGCGGTGGAC CGCGGCGAGA TCGCGGTGAT CGTCGGACCG
AACGGCGCGG GCAAATCCAC GGCGATGAAG GCTGTGTTCG GGATGCTGAA CATACATACC
GGATCCGTAC GGCTCGATGG CGAGGACATC ACCGGCCTCA GCCCCCAGGC GCGCGTGGCC
AAGGGCATGG CCTTCGTGCC GCAGGTGAAC AACATCTTCA CCACCATGAC CGTGGAGGAG
AACCTCGAGA TGGGCGCCTT CCTGCGCCGG GACGACATTT CGGAAACGAT GGAGCAGGTT
TACGAGCTGT TCCCGATCCT GCGCGAAAAG CGCAGGCAGG CGGCGGGCGA GCTGTCGGGC
GGGCAGCGCC AGCAGGTCGC CGTGGGCCGC GCGCTGATGA CCCGGCCGCA GGTCCTGATG
CTGGACGAGC CGACCGCCGG GGTCAGCCCC ATCGTGATGG ACGAGCTTTT CGACCGGATC
ATCGAGGTGG CGCGCACAGG CATCTCCATC CTGATGGTCG AGCAGAACGC GCGCCAGGCG
CTGGAGATCG CCGACAAGGG CTATGTCCTC GTGCAGGGGC GCAACCGCTA CACCGACACC
GGACAAGCGC TGCTGGCCGA TCCGGATGTG CGCAAATCGT TCCTGGGGGG CTGA
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| Protein sequence | MSAQNPYQEA RGNKDASITN PRPGGTLTPG TAPEGRSAAH PGEPFLIGDG MTGGYGSGAD
ILHDCTLAVD RGEIAVIVGP NGAGKSTAMK AVFGMLNIHT GSVRLDGEDI TGLSPQARVA
KGMAFVPQVN NIFTTMTVEE NLEMGAFLRR DDISETMEQV YELFPILREK RRQAAGELSG
GQRQQVAVGR ALMTRPQVLM LDEPTAGVSP IVMDELFDRI IEVARTGISI LMVEQNARQA
LEIADKGYVL VQGRNRYTDT GQALLADPDV RKSFLGG
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