Gene Dshi_1515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1515 
SymbolhisI 
ID5713172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1577589 
End bp1577948 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content66% 
IMG OID641267430 
Productphosphoribosyl-AMP cyclohydrolase 
Protein accessionYP_001532858 
Protein GI159044064 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0139] Phosphoribosyl-AMP cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.502918 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.632575 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTCG ATCCCGCAAG CCTGCGATAT GACGACCAAG GCCTGATCCC CGCAATCGCC 
CAGGATGCCG CAAGCGGCGA GGTGCTGATG ATGGCCTGGA TGAATGCCGA GGCCGTGGCG
CGCACGCTGG AGACCGGGCG CGTGACCTAC TGGTCGCGCT CGCGCCAAGC GTTCTGGATC
AAGGGCGAGT CCTCGGGCCA TGTGCAGACC CTGGTCGAGA TGCGCGTGGA CTGCGACCGC
GATTGCCTGC TGCTCCAGGT CCGCCAGGAA GGCCCAGCAT GCCACACCAA CCGGCGGACC
TGTTTCTACA CCGCGATCCG GGACGGCGCG GAGGTCGAAT TGATGGCGCC CATGGTCTGA
 
Protein sequence
MEFDPASLRY DDQGLIPAIA QDAASGEVLM MAWMNAEAVA RTLETGRVTY WSRSRQAFWI 
KGESSGHVQT LVEMRVDCDR DCLLLQVRQE GPACHTNRRT CFYTAIRDGA EVELMAPMV