| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1504 |
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| Symbol | lpxB |
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| ID | 5712683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1563814 |
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| End bp | 1564956 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641267419 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_001532847 |
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| Protein GI | 159044053 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00835265 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTGT TCCTGATCGC GGGGGAGCCG TCGGGCGACA AGCTGGGCGC GGCACTGATG
GCGGGGCTGA AGACCCTCGC CCCGGAGGTG ACGTTCCAGG GTGTCGGCGG CCCACTGATG
CAGGCCGAGG GGATGGAGAG CCTGTTTCCC ATGGACGAGC TGAGCGTCAT GGGGATCGCC
GAGGTGCTGC CGAAATACTG CGCGCTGAAG CGGAGGATCG CGCAGACTGC CGAGGCGGTG
ATCGCGGCCG CGCCGGATGT GCTGGTGACC ATCGACAGCC CGGATTTCTG CCTGCGGGTG
GCAAAGATCG TGAAGGCCGC AGGGCCGCAG CGCATCGTCC ATTACGTGGC GCCCTCGGTC
TGGGCCTGGC GTCCGGGGCG GGCCAGGAAA ATGGCGCGGG TGGTGGACGA GGTGCTCTGC
CTGCTGCCCT TCGAGCCGCC CTACATGACC GAGGCCGGGA TGGGCGCGCA TTTCGTGGGC
CACCCGGTCG TGGCCGAGCC TGTCGCGACG CAGGCGGAGG CCGACGCCTT TCGCACGGCG
CACGGGATCG CGCCGGAGGC GCCGCTGATC CTGGCGCTGC CCGGCTCGCG CCGCGGCGAG
GTGGCGCGGC TGGCGGAGCG GTTCGGCGCA GCGCTCCGGA TCGCGGTGGC GGCGCGCCCG
GAGACCCGCG TTGTCGTGGT CCCGGCCCCC GCCGTGCGCG CGATGGTGGC CGAGGCGCTG
CGCGACTGGC CCGGCGCGCC GGTTCTGACC TCGGGCAGCG ATCTGGCGGA GAAACGCGCG
GCGTTCCGGG CGGCGGACCT TGCGCTTGCG GCTTCGGGGA CCGTGTCGCT GGAACTGGCG
GCCAGCGGGA CGCCCATGGT GATCGCCTAT GACATGAACT GGCTGTCACG GCTGCTGATC
GGATGGTTGC TGAGGATCGA CACGGTGACG CTGGTCAACC TGGTGTCGGA CACGCGCGCG
GTGCCGGAAT GCCTCGGCCG GGACTGCACA CCTGCGCGGA TCGGGCAGGG GCTTGTCAGC
TTGCTGAACG ATCCCGCAGC CCAGACGGCC CAGCGAGAGG CGATGACCAG CACGATGACG
CGGCTGGGGC AGGGTGGGGA GGCGCCAGGC CTTCGGGCCG CGCGGGCGGT GTTGCGCCGC
TAG
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| Protein sequence | MRVFLIAGEP SGDKLGAALM AGLKTLAPEV TFQGVGGPLM QAEGMESLFP MDELSVMGIA
EVLPKYCALK RRIAQTAEAV IAAAPDVLVT IDSPDFCLRV AKIVKAAGPQ RIVHYVAPSV
WAWRPGRARK MARVVDEVLC LLPFEPPYMT EAGMGAHFVG HPVVAEPVAT QAEADAFRTA
HGIAPEAPLI LALPGSRRGE VARLAERFGA ALRIAVAARP ETRVVVVPAP AVRAMVAEAL
RDWPGAPVLT SGSDLAEKRA AFRAADLALA ASGTVSLELA ASGTPMVIAY DMNWLSRLLI
GWLLRIDTVT LVNLVSDTRA VPECLGRDCT PARIGQGLVS LLNDPAAQTA QREAMTSTMT
RLGQGGEAPG LRAARAVLRR
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