Gene Dshi_1501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1501 
SymbolfabZ 
ID5712680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1561725 
End bp1562216 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content62% 
IMG OID641267416 
Product(3R)-hydroxymyristoyl-ACP dehydratase 
Protein accessionYP_001532844 
Protein GI159044050 
COG category[I] Lipid transport and metabolism 
COG ID[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 
TIGRFAM ID[TIGR01750] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.817883 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCA AGGATAACGA GACCGCGGAG TTTGAAACGA CAGCGGATCT CGCGATGATC 
CAGCGCATCC TGCCCCATCG TTATCCCTTC CTGCTCGTGG ACAAGGTGAT CGACATGGTC
CGGTTCAAAT CCGCGCTCGG CATCAAGAAC GTGACCTTCA ACGAGCCGCA TTTCCAGGGC
CATTTCCCGG GCGAGCCGAT CATGCCCGGC GTGATGATCG TCGAGGCGCT GGCGCAGACC
TCGGCGGTTC TGGTGGGGCA CTCCATGGCG TCCGCGGACG AGGATGTGAG CGTCTATTTC
ATGTCGATCG ACAACTGCAA GTTCCGCCGC AAGGTCGTGC CGGGCGATGT CATGTCGCTC
AGGGTCGAGA CCATGCGCGG CAAGCCCGGC GGCAAGGTCT GGAAGTTCCT CGGCGAGGCC
ATCGTGGAGG ATACGGTGGC CGCACAGGCC GAGTTCACCG CGATGATCAG CTTTCCCCAA
GCGGCCGCAT GA
 
Protein sequence
MNAKDNETAE FETTADLAMI QRILPHRYPF LLVDKVIDMV RFKSALGIKN VTFNEPHFQG 
HFPGEPIMPG VMIVEALAQT SAVLVGHSMA SADEDVSVYF MSIDNCKFRR KVVPGDVMSL
RVETMRGKPG GKVWKFLGEA IVEDTVAAQA EFTAMISFPQ AAA