| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1489 |
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| Symbol | |
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| ID | 5712668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1547754 |
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| End bp | 1548845 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641267404 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001532832 |
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| Protein GI | 159044038 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.868873 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.378182 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGCTT TCATCCTGCG CCGTTTCGGC GTCATGGCCC TGACCGCGCT TTGCGTCACC
TTCATCGTCT TCTTCATGAC GAACCTGCAG CCCAACCTCG AGAAGGTCGC CAAGAGCGAA
GGCTCGGTCC GCATGACCGA TGCCGAGGTC GCAAGCTGGC TGTCGAATAA CGGCTATGAC
CGGCCGATGC TGGTGCGCTA CGGCGAATGG CTGGGCCTGG TGCCGGGCTG GACCCGCACG
CTGGAGGATG GCGGGATGCG CGGGCGCTGC ATCGATGGCA TCTGGCGCAG CGGCGATCCC
GAACCCCCGG GCTTCTGCGG CCTGCTGCAG GGGGATTTCG GCACCTCGAC CGTCTTCAAG
GCCGATGTGG GCGGCGTGAT CGCGGAACGC CTGGCCCTCA CCGGCAAGCT GATGTTCTGG
GTGATGGTGG TGATGGTGCC CTCGGCGCTG CTGGTCGGTG TGCTGGCGGG AATGCGCGAG
GGCTCGCGCA CGGACCGTAC CCTGTCCACC GCCTCGATCA TCACCACCGC CACGCCGGAA
TACGTCTCGG GCGTGGTGCT GGTGGTGCTC TTCGCCTCCT CTACCGCCGG GCTCTCACCG
CTCTTTGCCG AATGGGGCTG GATCGACGGG CGCACGATCC TCAAGGGCTC CGCGGCCTCG
GCGGCCGAGG ACGCCACGCT GGAAAACTTC ACCCTGCCGG TGCTGACCAT GGCGCTTTAC
GGCATGGGCT ACATCGCGCG GATGACGCGG GCGTCCATGG CCGAGGTCAT GACCGCGCAA
TACATCCGCA CCGCGCGGCT CAAGGGCGTG AGCTTCCGCA ACATCGTGCT GAAACACGCC
CTGCGCAACG CGCTGATCGC GCCCTTCACG GTGATCATGC TGCAATTCCC CTGGCTGCTC
ACGGGCGTGG TGATCGTGGA AACGCTGTTC AACTACAAGG GCTTCGGCTG GACCCTGGTG
CAGGCCGCCT CGAACAACGA TGTCGAGCTG CTGCTGTCCT GCTCGGTGGT GGCGGTGATC
GTGGTGCTCG TGACACAGCT GATCTCGGAT ATCGGCTACG TCTTCCTCAA CCCCCGTATC
CGGATCGCGT GA
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| Protein sequence | MFAFILRRFG VMALTALCVT FIVFFMTNLQ PNLEKVAKSE GSVRMTDAEV ASWLSNNGYD
RPMLVRYGEW LGLVPGWTRT LEDGGMRGRC IDGIWRSGDP EPPGFCGLLQ GDFGTSTVFK
ADVGGVIAER LALTGKLMFW VMVVMVPSAL LVGVLAGMRE GSRTDRTLST ASIITTATPE
YVSGVVLVVL FASSTAGLSP LFAEWGWIDG RTILKGSAAS AAEDATLENF TLPVLTMALY
GMGYIARMTR ASMAEVMTAQ YIRTARLKGV SFRNIVLKHA LRNALIAPFT VIMLQFPWLL
TGVVIVETLF NYKGFGWTLV QAASNNDVEL LLSCSVVAVI VVLVTQLISD IGYVFLNPRI
RIA
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