| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1485 |
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| Symbol | |
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| ID | 5712664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1539700 |
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| End bp | 1542114 |
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| Gene Length | 2415 bp |
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| Protein Length | 804 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641267400 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001532828 |
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| Protein GI | 159044034 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase)
[COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.542815 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.236172 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCCC ACACTCAGGT CTGCGTGATC GGCGGCGGTG TTGTCGGCTG TTCGGTGCTC
TACCACCTGA CGAAGCTTGG CTGGTCCGAC GTGATGCTGC TGGAGCGCTC CGAACTGACC
TCCGGCTCCA CCTGGCACGC GGCGGGGGGC TTTCACACCC TGAACGGCGA CACCAACATG
GCCGCCCTGC AAGGCTACAC CATCGGGCTC TACAAGGAGT TGGAGGCACT GACCGGCCTG
TCCTGCGGTC TGCACCACGT GGGCGGCATC ACCCTGGCCG ACACTCCCGA GCGCTTCGAC
ATGCTCAAGG CCGAGCGCGC CAAGCACCGC TACATGGGGC TGGAGACCGA GATCCTCGGC
CCGGCCGAGA TCAAGGCCAT GGCCGATCTG GTCAACACCG ACGGGATCCT CGGCGGGCTC
TACGACCCGC TCGACGGCCA TCTCGACCCC TCGGGCACGA CCCACGCCTA TGCCAAGGCC
GCCAAACTCG GCGGCGCGCA GATCCACACG CACACCATGG TCACCGCGAC CACACCGAAC
CCCGACGGCA CCTGGACCGT CGAGACCGAC AAGGGCACCG TGATCGCCGA ACACTTGGTC
AATGCCGGCG GCCTCTGGGC GCGGGAGGTC GCGGCGATGG CGGGTGTCTA CCTGCCGCTT
CTGCCCATGG CGCACCAGTA TATCGTCACC GACGACATTC CCGAGATCTA CACCCGCGCC
ACCGAGTTCC CCCATGTGAT CGACCCCGGC GGCGAAAGCT ACCTCCGGCA AGAAGGCCGC
GGCCTCTGCA TCGGGTTCTA CGAGAAACCC TGCGAGGCGT GGTCCGTGGA CGGCACGCCC
TGGGACTTCG GGCACGAATT GCTCAACGAC CAGTTCGAGA AGATCGAGGA TAGCATCGCC
TTCGCCTACC GCCGCTTCCC GGTGCTGGAA ACCGCAGGGG TCAAATCGGT GATCCACGGC
CCCTTCACCT TCGCCCCCGA CGGCAACCCG CTCGTCGGTC CCGTGCCGGG GCTGCGCAAC
TACTGGTCGG CCTGCGCGGT CATGGCGGGC TTTTCGCAAG GGGGCGGCGT GGGCCTGGCG
CTCGCGCAAT GGATGATCGA GGGCGAGACC GAACGCGACC CCCGCGCCAT GGACGTCGCC
CGCTTCGGGC GCTGGACGAC GCCGGGCTAC ACGGTCCCCA AGGTAATCGA GAACTACCAG
AACCGCTTTT CCGTCAGCTA CCCCAACGAG GAACTGCCCG CCGCGCGCCC CTTCCGCACC
ACGGCGATGT ACGACATCTG GGACGGCATG GGCGCGGTCT TCGGCCAGAC CTACGGGCTG
GAGGTCGTCA ACTACTTCGC CCCTGAAGGC GCGCCGCGCT TCGAAACCCC AAGCTTCCGC
CGCTCCAACG CCTGGGGCGC GGTGAAGGCC GAGGTCATGG CCGTGCGCAC TGGCGTCGGC
ATCAACGAGT TGCAGAATTT CGGCAAGTTC CGCGTGACCG GCCCCGGCGC GCGGGCCTGG
CTCGACCGGA TCATGGCCGG CCGCATCCCC GCCCCCCGAC GCCTGTCGCT CAGCCCGATG
CTCGCACCCT CGGGGCGGCT GATCGGGGAT TTCACCATCT CCTGCCTTTC GGAGACCGAG
TTCCAGCTCA CCGCCTCCTA CGGCGCGCAG GACTATCACC TGCGGTGGTT CCAGACCCAT
CTCGACGACG GCGTCACTGT GGAAAACATC TCGGATGCGC GCACGGGGTT CCAGATCGCC
GGACCCAGGG CCCGCGAGGT GCTGGCCGCC TGCACCCGCG CGGATGTCTC GGCGGAGGCG
TTCCGCTTCT TCGACGTGGC GCCCATGACC ATCGGCATGG CCCACTGCCT CGTCCAACGG
GTCAGCTACA CGGGCGATCT GGGCTACGAG ATCTACTGCA GCCCGACCGA ACAGCGCCAC
CTCTTCCACA CGCTCTGGGA GGCCGGACAA CCCCATGGCA TCCGCCCTTT CGGGATGCGC
GCCATGATGT CCCTGCGGCT CGACAAGTTC TTCGGGGCCT GGAGCCGCGA GTATTCGCCC
GACTACACCG CCGCCGAGAC CGGGCTCGAC CGGTTCATCC ATTTCGGCAA GAACACCGCC
TTCATCGGCC GCAACGCGGC GGAGGCGGAG CGCGCCACGC CCCCCGCGCG CCAACTCTGC
GCCTTCGAGG TCGCCGCCAC CGACGCGGAT GTCGTGGCCT ACGAGCCGAT CTCGCTGGAC
GGCGAGGTCG TGGGCTTCTG CACCTCGGGG GGCTACGCGC ATTTCACAGG CAAATCCATC
GCCCTGGGCT TCGTGCCGCG CGAAATGGCC CAGGACGGGC TGGAGGCCAG CATCGAGATC
CTCGGCGACC ATTGCCCGGC CACCCTGATC ACCACACCGC TCTTCGATCC GGACGGGGCC
CGCATGCGCG GCTGA
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| Protein sequence | MKSHTQVCVI GGGVVGCSVL YHLTKLGWSD VMLLERSELT SGSTWHAAGG FHTLNGDTNM
AALQGYTIGL YKELEALTGL SCGLHHVGGI TLADTPERFD MLKAERAKHR YMGLETEILG
PAEIKAMADL VNTDGILGGL YDPLDGHLDP SGTTHAYAKA AKLGGAQIHT HTMVTATTPN
PDGTWTVETD KGTVIAEHLV NAGGLWAREV AAMAGVYLPL LPMAHQYIVT DDIPEIYTRA
TEFPHVIDPG GESYLRQEGR GLCIGFYEKP CEAWSVDGTP WDFGHELLND QFEKIEDSIA
FAYRRFPVLE TAGVKSVIHG PFTFAPDGNP LVGPVPGLRN YWSACAVMAG FSQGGGVGLA
LAQWMIEGET ERDPRAMDVA RFGRWTTPGY TVPKVIENYQ NRFSVSYPNE ELPAARPFRT
TAMYDIWDGM GAVFGQTYGL EVVNYFAPEG APRFETPSFR RSNAWGAVKA EVMAVRTGVG
INELQNFGKF RVTGPGARAW LDRIMAGRIP APRRLSLSPM LAPSGRLIGD FTISCLSETE
FQLTASYGAQ DYHLRWFQTH LDDGVTVENI SDARTGFQIA GPRAREVLAA CTRADVSAEA
FRFFDVAPMT IGMAHCLVQR VSYTGDLGYE IYCSPTEQRH LFHTLWEAGQ PHGIRPFGMR
AMMSLRLDKF FGAWSREYSP DYTAAETGLD RFIHFGKNTA FIGRNAAEAE RATPPARQLC
AFEVAATDAD VVAYEPISLD GEVVGFCTSG GYAHFTGKSI ALGFVPREMA QDGLEASIEI
LGDHCPATLI TTPLFDPDGA RMRG
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