| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1480 |
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| Symbol | |
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| ID | 5712658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1535034 |
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| End bp | 1536077 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641267394 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_001532823 |
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| Protein GI | 159044029 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0992802 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.257408 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACAT TGCTCAAAAC TGCCCTGACC GGGGCAGTGG CCCTGTCACT GTCCGCTGGT
CTCGCCGCCG CGCAGGATGT CACGCTGCGC TGTCAGCATT TCCTCAGCCC GCAGGGGTCG
ATCCCGAAGT TCTTCATCAC GCCCTGGGCG GAGAAGATCG AGGCGGAGTC CGAAGGCCGC
ATCAAGGTGG AGATCTATCC GGCGATGCAG TTGGGCGGCA AGCCGCCCGC GCTTTATGAC
CAGATCCGCG ACGGGGTGAT CGATTGCGGC TGGGCGCTGC CGGCCTATAC GCCCGGGCGA
TTCCCCGAGA GCGAGGTGTT CGAGCTGCCC TTCATGACGA CCATGTCGGC GGAAAACTCC
TCCCGTGCGG CGTGGGAGTT TACCGAGAAG TACCTGATGG AGCGGATGGG CGACATCCAC
CTGATGGCGG TCCATGTCCA CGGGCCCGGG GTGATCCACA AGAAGGGCGC GCCGATCATG
AGCACCGCGG ATTTCGACGG GCTCAAGCTG CGTGGTCCGT CGCGGCAGGC CAACAAGTTG
CTGGAGACCC TGGGCGCGAC GCCGGTGGGA ATGCCGGTTC CGGCGTTTCC CGAGTCGCTG
TCCAAGGGGA TTGTCGATGG CGGGGTCATC CCGTGGGAGA TCGTGCCGCC GCTGAAGGTG
CATGAGCTGG CCGACAGCCA CACCCAGATC GGCGGGGACC GGGCGCTTTA CAACACCTTC
TTCCTGTGGG GGATGAACAA GGCGACCTAT GAGGGCTTGC CGGAGGATCT CAGGGCGATC
ATCGACGCCA ATTCCGGACT GGAGGCCTCG GCCTGGGCCG GGCGCGCGAT GGACCAGGGC
GACGGGCTCG GCGAGGAGGT CGTGGCGGGC ACGGACAACA AGATCCACAC GCTGGACGAT
GCCACGGTGG CGGAGCTGCG CAAGATCGGC GACGATCTGA CCGCGGCCTG GATCGCCGAA
ATGGAGGACA AGGGCCTGCC CGGTGCGGCC ATGGTGGACG ATGCCAGGAT GCTGATCACC
AAGCACGAGG ATGGCAGCAG CTGA
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| Protein sequence | MNTLLKTALT GAVALSLSAG LAAAQDVTLR CQHFLSPQGS IPKFFITPWA EKIEAESEGR
IKVEIYPAMQ LGGKPPALYD QIRDGVIDCG WALPAYTPGR FPESEVFELP FMTTMSAENS
SRAAWEFTEK YLMERMGDIH LMAVHVHGPG VIHKKGAPIM STADFDGLKL RGPSRQANKL
LETLGATPVG MPVPAFPESL SKGIVDGGVI PWEIVPPLKV HELADSHTQI GGDRALYNTF
FLWGMNKATY EGLPEDLRAI IDANSGLEAS AWAGRAMDQG DGLGEEVVAG TDNKIHTLDD
ATVAELRKIG DDLTAAWIAE MEDKGLPGAA MVDDARMLIT KHEDGSS
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