Gene Dshi_1454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1454 
Symbol 
ID5712631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1513040 
End bp1513537 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content71% 
IMG OID641267367 
Producthypothetical protein 
Protein accessionYP_001532797 
Protein GI159044003 
COG category[S] Function unknown 
COG ID[COG2832] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0600527 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAGC TGACACCCCC CTTCGCAGGC GCCGTCCGGC CCCTCTGGGC CGCTGCCGGG 
GTTGTCTCGC TTGCGACCGG GTCGGTGGGC GCGGTCCTGC CCGTCCTGCC AACCACACCC
TTCATGATTC TCGGCGCGTT CTGCTTTGCC AAGGGCGCGC CCCGCCTTGC GCAAAGACTG
GAACAGCACG GGATTTTCGG CCCGATGATC GCCGAATGGC GCGCCCATCG GGCCATCGCC
CCGCGCGTCA GGGTCGTGGC GCACCTGATG ATGGGGGCCG CACTGGTCCT CAGCCTCGTG
GCGGGCGTGT CCGGGCCGGT GCTCGCCGTC CAGATGACCT GTCTGCTGGG CGCAAGCGCC
TATATCCTCA GCCGCCCGAG CGGCCGCCCC ACCCTCTCAG AGCCAGGCGC CGACACGGCC
CCAGCCAGAT CCCCGCGCCC CTCCGGCGCC AGCCCATCTG GAGTCTCTGC ATGGTCCGTT
CCCGCCTCCC GCCGCTGA
 
Protein sequence
MTQLTPPFAG AVRPLWAAAG VVSLATGSVG AVLPVLPTTP FMILGAFCFA KGAPRLAQRL 
EQHGIFGPMI AEWRAHRAIA PRVRVVAHLM MGAALVLSLV AGVSGPVLAV QMTCLLGASA
YILSRPSGRP TLSEPGADTA PARSPRPSGA SPSGVSAWSV PASRR