| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1439 |
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| Symbol | |
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| ID | 5712616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1494829 |
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| End bp | 1495872 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641267352 |
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| Product | D-cysteine desulfhydrase |
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| Protein accession | YP_001532782 |
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| Protein GI | 159043988 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2515] 1-aminocyclopropane-1-carboxylate deaminase |
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| TIGRFAM ID | [TIGR01274] 1-aminocyclopropane-1-carboxylate deaminase
[TIGR01275] pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.457826 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.632152 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGTA CAGAGACGCT GGACCGCCAG CACGCGCAGA TCGACCTGGA CCGCTTTCCG
CGGACACCGC TCTGCCACCA GCCGACCCCG ATCGAGGCAA TGCCACGGCT GAGTGCGGCG
CTGGGCGGCC CGTCGCTGTT CGTGAAGCGC GACGATTGTA CCGGGCTCGC CATGGGCGGC
AACAAGACGC GCAAGCTCGA ATTTCTGGTC GGCGAAGCCA TGGAGGAAAA AGCCGACATG
CTGGTCACCC AAGGCGCGGT GCAATCTAAC CACGTGCGGC AGACCGCGGC CGCCGCTTGC
AAGCTGGGCA TGAAATGCCA CGTTCTGCTT GAGCGGCGTG TGCCCGGGCG CGATGCCTCT
TACGAGAGCA CCGGCAACGT GCTGCTGGAC AACCTCTTCG GCGCCACGCA CGAGTTTCGT
CCCGCCGGGC TGGACATGAA TGCCGAGGCC CGCACCGTGA CAGAGCGGTT GCAGGCCGAG
GGGCATCGGC CCTATTTCAT TCCCGGCGGG GGCTCGAACC CCACCGGCGC GCTGGGCTAC
GTGGCCTGCG CCCGCGAGAT CGCCGAGCAC AGCCGCGCGA CCGGGCAGAG CTTCGACTGG
CTGGTGATGA GCACTGGCAG TACCGGCACC CATGCGGGGC TTGTGGCAGG GTTTCATGCC
ATGGGCCACG AGTTGCCCGT CATGGGCGTC AGCGTGCGCC AACCGCGGGA GCGGCAGATG
CAGGCGGTCC ATGCCCTGAC CCAGGCCACG CTGGAAAAAC TGGGCCATGA CGGCGTGCCG
CTGAAAAAGA TCATCGTCGA TGACGGCTAT GTCGGTGAAG GCTACGGCAT CCCTGCCCCG
TCCACTTTGG AGGCGATCCG CCTCACCGCG CGGCAGGAGG GCCTTCTGCT CGACCCGGTC
TATTCGGCCA AGGGGATGGC GGGCCTGATC GGCATGGTGC GCAGCGGCTT TTTCAAGCCA
TCCGACAGCG TGCTGTTCCT GCACACCGGC GGGGCCTCGG CCCTGTTTGC CTACGAGGAC
CAGATCACGG CCCTCGCCGA CTGA
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| Protein sequence | MSSTETLDRQ HAQIDLDRFP RTPLCHQPTP IEAMPRLSAA LGGPSLFVKR DDCTGLAMGG
NKTRKLEFLV GEAMEEKADM LVTQGAVQSN HVRQTAAAAC KLGMKCHVLL ERRVPGRDAS
YESTGNVLLD NLFGATHEFR PAGLDMNAEA RTVTERLQAE GHRPYFIPGG GSNPTGALGY
VACAREIAEH SRATGQSFDW LVMSTGSTGT HAGLVAGFHA MGHELPVMGV SVRQPRERQM
QAVHALTQAT LEKLGHDGVP LKKIIVDDGY VGEGYGIPAP STLEAIRLTA RQEGLLLDPV
YSAKGMAGLI GMVRSGFFKP SDSVLFLHTG GASALFAYED QITALAD
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