| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1438 |
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| Symbol | |
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| ID | 5712615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1493812 |
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| End bp | 1494777 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641267351 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_001532781 |
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| Protein GI | 159043987 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0879571 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.595095 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAA CGTTGAAATC CTTCGGACTG GCCACCGCGG TCAGCGTGCT GGCCCTGCCG
GCGCTGGCCT CGGAGAAGGT CAGCATCGGC GTGCCGTCCT GGACCGGCGC GCAGGCCATC
GCCCATGTGC TGGGCGAGGT CGTCACCTCG CGCATCGGCG GCGAGGTCGA GTACGTGCCC
GGCAACAACG CCACGATCTT TCAGGCGATG GACCAGGGCC GCGGCGATAT CGACGTCCAC
CCGGATGTCT GGCTGCCCAA CCAGGAGAGC TTCACCAACA AGTATGTGGA CGAGGCCGGC
ACCGTCACCC TGTCGTCGAA CCCCTACCAG GGCAACCAGG GCTTCTGCGT GACCCAGGAT
TTCGCCGCAG CCCATGACAT TACCGACATC GCCGATCTGG GTCGGCCGGA CGTGGCCGCC
CTGATGGACA GCGACGGCAA CGGGCGCGGC GAGATGTGGA TCGGCGCGCC CGGTTGGGCC
TCGGCCAATG TCAACGAGGT CAAGGTCCGC GACTACGGCC TGCTGGACTT CATCGAGCCG
ATCCGCGCCG AGGAGGCCGT GAAAACCGCG CGCATCAAGG ACTCCATTGC CAAGGGCGAG
GGCTATGCGT TCTATTGCTA CGAGCCCCAC GCGGTGTGGT TCATGTTCGA TGTCACGATG
TTGACCGAGC CGACCTTTGA CCCGGCGAAA TACGTCATGG TGCAGCCCTC CGATGACGCG
GACTGGTACG AGAAGTCCAT GGTCGCGACC AAGGACGCCC TGAAGGACGT GCAGATCGCG
TGGTCGAACT CCCTCGTGGA TCGCTCGCCC GCAATTGCGG AGTTCTTCGC CAATTTCCAG
CTGAATGCCG AGGATGTCAG CCAGCTTGCC TACCAGATCA GTGCCCAGGG CCGTGATCCG
GCCGAGGTCG CGGCGGAATG GGTGAACGCC AACTCCGACC GCGTCGATGG CTGGCTCGGC
CTCTGA
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| Protein sequence | MKTTLKSFGL ATAVSVLALP ALASEKVSIG VPSWTGAQAI AHVLGEVVTS RIGGEVEYVP
GNNATIFQAM DQGRGDIDVH PDVWLPNQES FTNKYVDEAG TVTLSSNPYQ GNQGFCVTQD
FAAAHDITDI ADLGRPDVAA LMDSDGNGRG EMWIGAPGWA SANVNEVKVR DYGLLDFIEP
IRAEEAVKTA RIKDSIAKGE GYAFYCYEPH AVWFMFDVTM LTEPTFDPAK YVMVQPSDDA
DWYEKSMVAT KDALKDVQIA WSNSLVDRSP AIAEFFANFQ LNAEDVSQLA YQISAQGRDP
AEVAAEWVNA NSDRVDGWLG L
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