| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1437 |
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| Symbol | |
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| ID | 5712614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1492683 |
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| End bp | 1493738 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641267350 |
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| Product | glycine betaine/L-proline ABC transporter |
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| Protein accession | YP_001532780 |
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| Protein GI | 159043986 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.102284 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.596955 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGGCG ATACCGTCAT CGAGATATCG AATGTCTGGA AGATTTTCGG CGCCAACGCC
CAGGCAGCCC TTGAGGCGGT CCGCGACCGG GGGCTGAGCA AGGCCGAGAT CCTGGCCGAA
TTCAACGCGG TCGTGGGCGT GGCCGATGTC AGCCTGTCGG TGCGGCGCGG CGAGATCTTT
TGCATCATGG GGCTGTCGGG CAGCGGCAAG TCCACGCTGG TGCGCCATTT CAACCGCTTG
CTGGAGCCGA CCGCGGGCAG GATCGAGATC GAGGGGACCG ATGTCATGGC GCTCGGCACC
CAGGAGCTTC AACGCTTCCG CAACCGACAG ATCGGCATGG TGTTCCAGAA CTTCGCGCTG
ATGCCGCACC GTTCGGTGCT GGACAACGTG GCGATGCCAC TGGAGATCCG GAAGGTCCCC
AAGAACGAGC GCATGCGCCA GGCCGCCGCG ATCCTCGACA TCGTCGAGCT GGGCGCCTGG
GGGGCGAAGT TCGCCCATGA ACTGCCGGGC GGGATGCAGC AGCGGGTGGG GCTGGCCCGG
GCGCTGGCGG CGAATCCGGA CGTGTTGCTG ATGGACGAGC CCTTCTCGGC ACTCGATCCG
CTGATCCGAA GGCAGTTGCA GGACGAATTC ATCCGATTGT CGAAGATCCT CAAGAAAACC
ACGATATTCA TCACCCATGA CCTCGACGAG GCGGTGCGCA TCGGCGACCG GATCGCCATC
ATGCGCGACG GCAAGGTGGT GCAGATGGGC ACCGCCGAGG ACATCGTGAT GCACCCGGCC
GATGACTACG TGGCCGATTT CGTGGCCGGG ATCTCGCGGC TCAAGGTGGT TCATGCCCAC
GCGGTGATGC AGCCGCTGGA GGCCTATCTC GCCACTCACG GCCCGCTTCC GGCCGCCGTC
CCCAAGGTCG ACGAGGGCGA AACCCTGAGC AACCTGATCA CGCTCGCCAT CGATGACGAG
AATCCGATCC TCGTGCAGGA CGCGGGTCGG GACGTCGGTA TCATCACCCG TGCGGACCTG
TTGCGCACGG TCATCGAGGG AACGGAAGTC TCATGA
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| Protein sequence | MHGDTVIEIS NVWKIFGANA QAALEAVRDR GLSKAEILAE FNAVVGVADV SLSVRRGEIF
CIMGLSGSGK STLVRHFNRL LEPTAGRIEI EGTDVMALGT QELQRFRNRQ IGMVFQNFAL
MPHRSVLDNV AMPLEIRKVP KNERMRQAAA ILDIVELGAW GAKFAHELPG GMQQRVGLAR
ALAANPDVLL MDEPFSALDP LIRRQLQDEF IRLSKILKKT TIFITHDLDE AVRIGDRIAI
MRDGKVVQMG TAEDIVMHPA DDYVADFVAG ISRLKVVHAH AVMQPLEAYL ATHGPLPAAV
PKVDEGETLS NLITLAIDDE NPILVQDAGR DVGIITRADL LRTVIEGTEV S
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