| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1432 |
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| Symbol | |
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| ID | 5712609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1488222 |
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| End bp | 1489370 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641267345 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001532775 |
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| Protein GI | 159043981 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.356996 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.729539 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGATC TGGAGGGACT GCTGGTTGTG TCGGTGGAGC ATGCTGTGGC GGCACCCTAT
GCCTCGTGCA AGCTGGCGGA TGCCGGCGCG CGCGTGATCA AGGTCGAGCG GCCCGAAGGC
GATTTCGCAC GCACATACGA TCAGCTCGTC CACGGTGAGA GTGCCTATTT CATATGGATC
AACCGCGGCA AGGAATCGGT CTGTCTCGAC CTGAAAGAGA CGGCAGACCT CGATATTCTG
CGCAATATGC TGCGATCTGC GGACGTGTTC ATTCAGAACC TCGCGCCGGG CGCCTTCGAC
CGATTGGGCT TGCCGATCGA AACCATCCGT TCGGACAACC CCGGGCTGAT CGTCTGTTCA
ATCTCCGGTT ACGGCACCGA GGGATCGGCG AAGGATCAAA AGGCCTATGA CCTGCTGATC
CAGGCCGAGA CGGGCCTGTC GTCGATCAAC GGAACCGAGC ATGGGCCTGC GCGCGTGGGC
GTGTCGGTCT GCGACATCGC TGCGGGTATG ACCGCGTACC AGGCGATCCT TCAGGGGCTG
ATCGCGCGTG CCCGGACGGG GCAGGGGCGC GAGATCGAGG TGTCGTTGTT TCATGCCATG
TCCGACTGGA TGAACGTTCC GTATCTGCAG TACAAATACG GCGGCAAGAA GCCCGCGCGC
ATGGGTCTCA AACACCCCAC GATCGCGCCC TACGGGGCGT TTCGGTGCGC CGACGGCAAA
GAGATCCTGA TCTCGATCCA GAACGAGCGG GAATGGGCGC GCTTGTGCGC AACCCTTCTG
AAGGATCCGC AGTTGCCCAG CCGCGAAGGC TGGCGCACCA ATTCGGAAAG GGTGGCAAAC
CGGCAGGCCG TGGACGAAGC CGTCGCGCAA GCCTTTGCAC AAGTACCGAG AGACAGGGCG
ATCGAGATGA TGCAGCAGGC CGATATCGCG TTTGGCCGAC TGAGCGATCC TGACGATCTG
GTTTCACATC CGCAAAACCG GGTTGTTACG GTAGACGTGT CCGGCAACTC GGTCGACCTG
CTGGCACCCG GCGCGCTTGT CAAAGGCGAA GACACCCAAT TCCGTTCGGT CCCGGAGCTT
GGTCGGGATA CCCAGCGCAT TCGCGAGGAG TTTTCCCCGC GTTTGGGCAC GCTTCTGGCC
GGTAAGTGA
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| Protein sequence | MSDLEGLLVV SVEHAVAAPY ASCKLADAGA RVIKVERPEG DFARTYDQLV HGESAYFIWI
NRGKESVCLD LKETADLDIL RNMLRSADVF IQNLAPGAFD RLGLPIETIR SDNPGLIVCS
ISGYGTEGSA KDQKAYDLLI QAETGLSSIN GTEHGPARVG VSVCDIAAGM TAYQAILQGL
IARARTGQGR EIEVSLFHAM SDWMNVPYLQ YKYGGKKPAR MGLKHPTIAP YGAFRCADGK
EILISIQNER EWARLCATLL KDPQLPSREG WRTNSERVAN RQAVDEAVAQ AFAQVPRDRA
IEMMQQADIA FGRLSDPDDL VSHPQNRVVT VDVSGNSVDL LAPGALVKGE DTQFRSVPEL
GRDTQRIREE FSPRLGTLLA GK
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