| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1416 |
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| Symbol | |
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| ID | 5712592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1469815 |
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| End bp | 1470858 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641267328 |
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| Product | ABC transporter related |
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| Protein accession | YP_001532759 |
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| Protein GI | 159043965 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.10901 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAGA TCCGGCTGAA CCATGTGCAG AAACGCTGGG GCTCCTTCGT CGGGGTGGAG
GATTTCCACC TGACGATCCC GGATCGCGAG TTCCTGGTGC TGCTGGGCCC GTCGGGCTGT
GGCAAGACCA CGACCATGCG CATGATCGCG GGGCTGGAGG AGCCGAGTTC GGGGGAGATC
TGGATCGGGG ACCGGATGGT CAACGCGCTC GACCCCAAGG ACCGGGATGT GGCGATGGTG
TTCCAGAGCT ACGGGCTCTA TCCGAACATG AATGTCTACG AGAACATCCG GTTTCCGCTG
AAGGTTCGCA AGGTGCCGGA GGTCGAACAC GAGGCGCGGG TGATGCGGGC TTCGGCCATG
GTGGAGCTCG ACGATTTCCT GCATCGCAAG CCCGCGGCGC TCTCGGGCGG GCAGCGGCAG
CGGGTGGCGC TGGCGCGCGC CATCGTGCGC GAGCCGAACG TGTTCCTGAT GGACGAGCCC
CTGTCGAACC TCGATGCCAA GCTGCGGGTC AGCACGCGCG CGCAGATCAA GAACCTCAGC
CACGAATTGC AGGTCACGAC GATCTACGTC ACCCATGACC AGATCGAGGC GATGACCCTG
GCGGACCGGG TGGTGGTGAT GTCGGCAGGC GTGGTGCAGC AGGTCGGCAC CCCGATGGAG
ATCTACGACC GGCCCGCAAA CACCTTCGTG GCGAGTTTCA TCGGCTCGCC GGCGATGAAC
CTGATGGAGG GGGCGGTGAC GGATGGCACC TTCCATGGCG ACCGAGTGGC GATCGCGGGG
CTGTCGGGGG CTGCGGGGCG GGTGACGCTG GGTTTTCGGG CCGAGGATGC GCAGGTGGTC
GACAGCGACG GGCAGATCGC GGCGCCGGTC TATTCCATGG AGTTGTTGGG GGATGCGACC
ATGGTGACGG TGAAGGCGGG CGGAACGCTG GTGGCCGTGA AGGCGCCCAA GGAGTTTCGG
GCAGAGATCG GCGCGCCGGT GCAGATCCGC ATTCCGACAG GGATCTGTCA CCTGTTTGAT
GCGCAAACGG GGGTGCACCT GTGA
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| Protein sequence | MAEIRLNHVQ KRWGSFVGVE DFHLTIPDRE FLVLLGPSGC GKTTTMRMIA GLEEPSSGEI
WIGDRMVNAL DPKDRDVAMV FQSYGLYPNM NVYENIRFPL KVRKVPEVEH EARVMRASAM
VELDDFLHRK PAALSGGQRQ RVALARAIVR EPNVFLMDEP LSNLDAKLRV STRAQIKNLS
HELQVTTIYV THDQIEAMTL ADRVVVMSAG VVQQVGTPME IYDRPANTFV ASFIGSPAMN
LMEGAVTDGT FHGDRVAIAG LSGAAGRVTL GFRAEDAQVV DSDGQIAAPV YSMELLGDAT
MVTVKAGGTL VAVKAPKEFR AEIGAPVQIR IPTGICHLFD AQTGVHL
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