| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1402 |
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| Symbol | |
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| ID | 5712578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1455157 |
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| End bp | 1456365 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641267314 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001532745 |
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| Protein GI | 159043951 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.744825 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGGAC TAGAGAAAAA AGACACCGTC CTTCTGCTGA TCGTGGCCGG GCTGACCATG
CTCGCCCCCT TCCTGCTCAA CCCCTTCCCC GAAGGCTCCG GCATGGCGCA GTTCAACGCG
GGCTACCCCG ACCTGATGCA GCGCTTCGTG ATCTTCGGGA TCTTCGCCAT CGGCTTCAAC
ATCCTGTTCG GGCTGACGGG CTATCTCAGC TTCGGCCACG CGGCCTTCCT CGGCGTGGGC
TCTTACGCGG CGATCTGGAT GATGAAGCTG CTGACCATGA ACGTGATCCC GGCGATCATC
ATGGCGATCG TGCTGGCGGG GCTGTTCTCG CTGCTGGTGG GGTGGATTTC GCTGCGCCGC
TCGGGGATCT ACTTCTCGAT CCTCACGCTG GCCTTCGCGC AGATGTCCTA TGCCCTGGCC
TACTCGGTCC TGACCCCGAT CACCGGGGGC GAGACCGGGC TGCAGCCCAA GGTCAACGAC
CCCCGCCTGC TCGACCCGGC CCTGGCCGAG GGCGCGACGC CGTCCGCCAA CCTCTTCGGG
CTGACGATGA AATCGAGTTA CGAGCTCAAT GTCGGCGGCT GGCTCTTCAC GTTCAACGCG
GGCTACTACC TGGCGGCCGT GATCATGCTG ATCAGCTTCT ATGTGGCGAT CCGCATCTTC
CGCTCGCCCT TCGGGATGAT GCTGCGCGCG GTCAAATCCA ACCAGCAGCG GATGAACTAC
ACCGGCCTGA ACTCCAAACC CTACACGCTG GCGGCCTTCG TGATCTCGGG CATGTATGCC
GGGCTCGCCG GTGGCCTGAT GGTGGCGATG GACACGCAAG TGGGGCCCGA GCGGATGTTC
TGGACCGCCT CCGGAGAGGT GGTGCTGATG ACCATCCTCG GCGGCGCGGG AACCCTGATC
GGCCCGGTCC TGGGCGCGGG CATGATCAAG TACATGGAGA ACATCATCTC CAAGATCAAC
GAGACCATCC TGCACCAGTG GTTCGCCTTC CTGCCCGACG GGATGGAGGA CGCGCTCGTC
GCCATGGTCT ATCCCTTCAT CGGCAAGGGC TGGCACCTGA CCCTCGGCAT CATCTTCATG
CTGGTGGTGA TCTTCCTGCC CGGCGGCCTC GTCGAAGGCG GCCAGCGCAT CGCGCGCCTG
TTCGGGCGCG GCAAGAAAGC CGACGCTGAA GGCGACAAGA AATCCGCCGA AACCACACCG
GCCGAATAA
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| Protein sequence | MFGLEKKDTV LLLIVAGLTM LAPFLLNPFP EGSGMAQFNA GYPDLMQRFV IFGIFAIGFN
ILFGLTGYLS FGHAAFLGVG SYAAIWMMKL LTMNVIPAII MAIVLAGLFS LLVGWISLRR
SGIYFSILTL AFAQMSYALA YSVLTPITGG ETGLQPKVND PRLLDPALAE GATPSANLFG
LTMKSSYELN VGGWLFTFNA GYYLAAVIML ISFYVAIRIF RSPFGMMLRA VKSNQQRMNY
TGLNSKPYTL AAFVISGMYA GLAGGLMVAM DTQVGPERMF WTASGEVVLM TILGGAGTLI
GPVLGAGMIK YMENIISKIN ETILHQWFAF LPDGMEDALV AMVYPFIGKG WHLTLGIIFM
LVVIFLPGGL VEGGQRIARL FGRGKKADAE GDKKSAETTP AE
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