Gene Dshi_1394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1394 
Symbolaat 
ID5712570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1446363 
End bp1447034 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content70% 
IMG OID641267306 
Productleucyltransferase 
Protein accessionYP_001532737 
Protein GI159043943 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2360] Leu/Phe-tRNA-protein transferase 
TIGRFAM ID[TIGR00667] leucyl/phenylalanyl-tRNA--protein transferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0170728 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCATG ACATGTACCC TAATTCTCCG CCGCGGCTGA CGCCCGACCT GCTGCTGCGT 
GGGTATATGG CGGGCATCTT CCCCATGGCC GAAGCGCGCG ATGACGACGC GGTGTTCTGG
GTGGATCCGC GCCAGCGCGG GGTGCTGCCG CTGGACGGGG TGCATGTGTC GCGCAAGCTG
CGCCGGTTCC TGGCGCGCAC GGAATGGACG CTGAGCCTGA ACCAGGACTT CGCCGGGGTC
GTGGCCGGCT GCGCCGACCG GGACGAGACC TGGATCAACG ATCAGATCTT CGACGCCTAC
ACGGCCCTGC ATGCCATGGG CTTCGCCCAT GCGCTGGAGG TCCGCGAGGA CGGCGCGCTG
ATCGGCGGGG TCTACGGCGT GGCGATCGGG ACGGCGTTTT TCGGCGAGAG CATGTTCTCG
CGGCGCCCGA ACGGCTCGAA GGTGGCGCTG GTGGCGCTGT GCGCGCATTT GCGACGCTGC
GGCTATACCC TGTTCGACAC GCAGTTCGTC ACCCCGCATC TGGCGACCAT GGGCGCGGTG
GAAATCTCGC GCGACAGCTA CCGCGCGCAG CTGCGGGCGG CCCTGTCGGC CAAGGCCGAC
CTCACGGCGC GCCCCCTGCC CCGAACGCCC GCGCAGATCC GCGCGCCCGG CCCCGGACAA
CCCCGCTCCT GA
 
Protein sequence
MAHDMYPNSP PRLTPDLLLR GYMAGIFPMA EARDDDAVFW VDPRQRGVLP LDGVHVSRKL 
RRFLARTEWT LSLNQDFAGV VAGCADRDET WINDQIFDAY TALHAMGFAH ALEVREDGAL
IGGVYGVAIG TAFFGESMFS RRPNGSKVAL VALCAHLRRC GYTLFDTQFV TPHLATMGAV
EISRDSYRAQ LRAALSAKAD LTARPLPRTP AQIRAPGPGQ PRS