Gene Dshi_1390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1390 
Symbol 
ID5712566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1444131 
End bp1444565 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content65% 
IMG OID641267302 
ProductNADH dehydrogenase 
Protein accessionYP_001532733 
Protein GI159043939 
COG category[C] Energy production and conversion 
COG ID[COG3761] NADH:ubiquinone oxidoreductase 17.2 kD subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.450326 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTGG ACGCCCGCCC CGCAATCGTC CATATCTGGG CCAACCCGAC CGGAGGCATC 
ATGAAGTTCC TGTTGCAACT CATCACCTGG TGGAACGCCG AGACCCTGGG CATGCGCCTG
TGGAGCAAGC GCAACGGCGA GAAGGTGGGC GAGGACGAAG CCGGCAATAG CTTCTTCCAG
ACCAAGGACG GCAAGCGTCG CTGGGTCATC TATAACGGCG AGGTCGAGGC GAGCCGCGTC
TCCCCCGACT GGCACGGCTG GCTGCATTTC ACCTGGAAAG AACCGCCCAC CGCCAAGCCG
CTGGCGCGCA AGTCCTGGGA AAAGCCCCAT GAGGAAAACC TCACCGGCAC GCCGCTGGCC
TACGCCCCCG CGGGCTCCCT GCGCCGTCCC AAGCCGGTGG AGCGCGCGGA TTATGAGGCA
TGGCAGCCGG AATGA
 
Protein sequence
MSLDARPAIV HIWANPTGGI MKFLLQLITW WNAETLGMRL WSKRNGEKVG EDEAGNSFFQ 
TKDGKRRWVI YNGEVEASRV SPDWHGWLHF TWKEPPTAKP LARKSWEKPH EENLTGTPLA
YAPAGSLRRP KPVERADYEA WQPE