| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1387 |
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| Symbol | clpX |
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| ID | 5712563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1440553 |
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| End bp | 1441812 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641267299 |
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| Product | ATP-dependent protease ATP-binding subunit ClpX |
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| Protein accession | YP_001532730 |
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| Protein GI | 159043936 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0849267 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAACA ACTCCGGCGA CAGCAAGAAT ACGCTCTACT GCTCCTTCTG CGGCAAGAGT
CAGCATGAAG TGCGCAAGCT GATTGCAGGG CCCACCGTGT TCATCTGCGA TGAATGCGTC
GAGCTGTGCA TGGACATCAT CCGCGAAGAG ACGAAATCAT CCGGTCTGAA ATCGTCCGAA
GGCGTTCCGA CGCCGCAGGA GATTTGCGAT GTCCTCGATG ATTACGTGAT CGGCCAGAGC
CACGCCAAGC GCGTGCTCTC GGTGGCGGTC CATAACCACT ACAAACGTCT GAACCATGCG
GGCAAGACGG ATATCGAACT GGCCAAGTCC AACATCCTGC TGATCGGGCC CACGGGCTGC
GGCAAGACGT TGCTGGCTCA GACGCTGGCG CGGATCCTCG ATGTGCCTTT CACCATGGCG
GATGCGACGA CCCTGACCGA AGCCGGTTAT GTGGGCGAGG ATGTGGAGAA TATCATCCTC
AAGCTGCTAC AGGCGTCGGA ATACAATGTG GAGCGCGCGC AGCGCGGCAT CGTCTATATC
GACGAGGTCG ACAAGATCAC CCGCAAGTCC GACAATCCCT CGATCACGCG GGATGTCTCG
GGCGAAGGGG TGCAGCAGGC GCTTCTGAAG ATCATGGAAG GCACGGTCGC CTCGGTGCCG
CCCCAGGGCG GGCGCAAACA TCCGCAGCAG GAGTTCCTGC AGGTGGACAC GACCAACATC
CTGTTCATCT GCGGCGGTGC GTTCGCGGGT CTCGAGAAGA TCATCGCGCA GCGCGGCAAG
GGCTCTGCCA TCGGCTTCGG TGCCGATGTG AAGGAGAACG ACACCCGCGG CGTGGGGGAG
ATGTTCGGCG AGCTGGAGCC GGAGGATCTG CTGAAATTCG GGCTGATCCC GGAATTCGTA
GGCCGCCTGC CGGTGATCGC GACCCTCACG GATCTCGACG AGGACGCGCT GGTCACGATC
CTGACCCAGC CGAAGAACGC GCTGGTCAAG CAGTACCAGC GGCTCTTCGA GTTGGAGGAT
GCGCAGCTGA CCTTCACCGA GGATGCGCTG AACGCCATCG CCGGGCGCGC GATCGAACGC
AAGACCGGGG CACGCGGCCT GCGCTCGATC CTCGAGGACA TCCTGCTGAA CACGATGTTC
GACCTGCCGG GTCTGGACAA CGTGGACGAG GTGGTGGTCA ACGAAGAGGT CGTCTCGGGC
GATGCGCAGC CGCTGCTGAT CTATGCCGAG CGCAAGGAAG AGCCCGCCAC CGTGGGCTGA
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| Protein sequence | MANNSGDSKN TLYCSFCGKS QHEVRKLIAG PTVFICDECV ELCMDIIREE TKSSGLKSSE
GVPTPQEICD VLDDYVIGQS HAKRVLSVAV HNHYKRLNHA GKTDIELAKS NILLIGPTGC
GKTLLAQTLA RILDVPFTMA DATTLTEAGY VGEDVENIIL KLLQASEYNV ERAQRGIVYI
DEVDKITRKS DNPSITRDVS GEGVQQALLK IMEGTVASVP PQGGRKHPQQ EFLQVDTTNI
LFICGGAFAG LEKIIAQRGK GSAIGFGADV KENDTRGVGE MFGELEPEDL LKFGLIPEFV
GRLPVIATLT DLDEDALVTI LTQPKNALVK QYQRLFELED AQLTFTEDAL NAIAGRAIER
KTGARGLRSI LEDILLNTMF DLPGLDNVDE VVVNEEVVSG DAQPLLIYAE RKEEPATVG
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