| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1384 |
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| Symbol | |
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| ID | 5712560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1437354 |
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| End bp | 1438355 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641267296 |
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| Product | permease protein of ABC transporter |
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| Protein accession | YP_001532727 |
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| Protein GI | 159043933 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.178302 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGTA CAACCACTTC GCTTCTGGCG ATCGCGCTCG TATGCGGCGC CTCCGCTGCC
TCTGCCGAGA ACGCCAAGGT CGTCTTCGGC ACCAACTGGC TGGCCCAGGC CGAGCATGGC
GGGTTCTACC AGTCCGTGGC CGACGGCACC TATGCCGCTT GTGGTCTGGA TGTCGAGATC
ATCTCGGGCG GCCCGCAGGT CAACAACCGG GCCCTGATGC TGGCGGGCCG GATCGACTAT
CACATGGGCG GAGACATGCT GCAGGCGTTC AACGCGGTGA AGGAGGACAT TCCCGTCGTC
ATGGTCGCCG CGACCTTCCA GAAGCATCCG CAGGTGATCC TTGCCCACCC GGGCGAGGCC
GACAGTTGGG AAGAGCTGAA GGATCTCACC CTGTTGATCG GGGATAATGG CTTCACGTCC
TACTACCAGT GGATGATCGC CGAGCACGGA TTCACCGTGG AGCAGCGCCA GCCCTATACG
TTCAATCCCG CGCCCTTCAT CGCGGACAAG CGCGTGGGCA TGCAGGGCTA TCTCAGCTCC
GAACCCTTCG CGGTCGAAAA GGAGGCCGGG TTCAAGCCCA ACGTGTTCCT GATCGCCGAT
GCGGGCTTTT CCAGCTACGC CACCATGGTC GAGACCATGC AGGCCACGAT CGACGAGAAG
CCCGAGCAGG TGAAGTGCTT CGTCGAGGGA TCGATCAAGG GCTGGTACAA TTATCTCTAC
GGCGATCCGT CCGCGGCCAA CGAACTGATC AAGGCGGCGA ACCCGGACAT GACCGATGAC
AAGCTCGCCT TTGCGCGCAA CATGATGAAG GACGAGGGCA TCGTGGACAG CGGCGACGCA
CTGGAGATGG GCATCGGCGC GATCAACCCG GACGTGGTGG CCGATTTCTA CGCCAAGATG
GTCAAGGCCG GGGTGATCGA GGACGGGCTC GACATCGCGG CGAGCTATAC CACACAGTTC
GTGAACCAGG GTTTGGGCAT GGATCTCAAG CCCGGCGGCT GA
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| Protein sequence | MTRTTTSLLA IALVCGASAA SAENAKVVFG TNWLAQAEHG GFYQSVADGT YAACGLDVEI
ISGGPQVNNR ALMLAGRIDY HMGGDMLQAF NAVKEDIPVV MVAATFQKHP QVILAHPGEA
DSWEELKDLT LLIGDNGFTS YYQWMIAEHG FTVEQRQPYT FNPAPFIADK RVGMQGYLSS
EPFAVEKEAG FKPNVFLIAD AGFSSYATMV ETMQATIDEK PEQVKCFVEG SIKGWYNYLY
GDPSAANELI KAANPDMTDD KLAFARNMMK DEGIVDSGDA LEMGIGAINP DVVADFYAKM
VKAGVIEDGL DIAASYTTQF VNQGLGMDLK PGG
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