| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1381 |
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| Symbol | |
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| ID | 5712557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1434352 |
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| End bp | 1435626 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641267293 |
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| Product | cytosine deaminase-like protein |
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| Protein accession | YP_001532724 |
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| Protein GI | 159043930 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.283067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTACC GCGCATTGCC CAGCGGCGCC TTTACGATGA CGAACGTGCA TGTGCCCGCC
TGCCTTTTGG GGCAGGACGG GGACCTGGTC AGGACCGAGA TTTCCATCGA TGCCCAAGGC
GACCTGTCGG AGCCGCAGCC CATCGCGGTG GACATGGAAG GCGCGCTCGT GCTGCCGTGC
TTCACCGACA TGCACACCCA TCTGGACAAG GGCCATATCT GGGGGCGCAG TCCGAACCCC
GACGGTACGT TCATGGGCGC GCTCAGCACC GTGGCCGAAG ACCGCGCGGC GCGCTGGTCG
GCTGAGGATG TGCGGCGCCG GATGAGCTTT GCCCTGCGCT GCGCCTATGC CCACGGGACG
CGGGCGATCC GCACGCATCT CGACAGCATT CCGCCGCAGG ACGGGATCTC CTTTCCGCTC
TTTCGCGACA TGCAGGCCGA GTGGGCCGGC CGGATCGAGT TGCAGGCGGT CTGCCTGATC
GGCTGCGATC ACTTCTCGAC CGACGGGCCG TTCAAGGCCA CCGCCGATCG GGTGGCCGAG
ACCCCCGGCG GGGTTCTGGG CATGGTGACC TACCCGGTGC CGGACCTGAT CGACCGGCTG
CGCGGCTTCT TCGCCATGGC CGCCGAGCGG GGCCTTGCCG CCGATTTCCA CGTGGACGAA
ACCATGGATC CGTCGTCCGA GACCCTGCGC GCGATTGCCG AGACCGCCCA TGAGGTGGGG
TTCGACGCGC CGATCACCGT TGGCCATTGC TGCTCGCTCG GCACGCAAGA CGAGGCCCGG
GCGCTGGACA CGCTGGACCT GGTCGCGCAG GTGGGGATCA ACGTGGTGTC GCTGCCCTTG
TGCAACCTCT ACTTGCAGGA CCGTCATGCG GGCCGGACCC CGCGCGGGCG CGGCATCACG
CTCGTGCACG AGATGATGGC GCGGGACATT CCCGTGGCCT TTGCCTCGGA CAACACCCGC
GATCCGTTCT ACGCCTATGG CGACATGGAC ATGGTCGAGG TGATGCGGGA GGCGACGCGG
ATCGGGCATC TCGATCACGG GCGCTTCGAC TGGGTGCGGG CCTTCACCGC GACCCCGGCG
GCGATCTGCG GCTTCGACGC GCCGAGCCTT GCGCCCGGCG CGCCTGCGGA CCTGGTGATC
ACCCGCGCGC GGAGCTGGAA CGAGTTCTTC TCCCGCCCGC AAAGCGACCG GATCGTGCTG
CGCGGTGGCG AGCCCATCGA CCGCACCCTG CCCGATTACG CAGAACTGGA CGACCTGATG
GAGACGCCCC AATGA
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| Protein sequence | MDYRALPSGA FTMTNVHVPA CLLGQDGDLV RTEISIDAQG DLSEPQPIAV DMEGALVLPC
FTDMHTHLDK GHIWGRSPNP DGTFMGALST VAEDRAARWS AEDVRRRMSF ALRCAYAHGT
RAIRTHLDSI PPQDGISFPL FRDMQAEWAG RIELQAVCLI GCDHFSTDGP FKATADRVAE
TPGGVLGMVT YPVPDLIDRL RGFFAMAAER GLAADFHVDE TMDPSSETLR AIAETAHEVG
FDAPITVGHC CSLGTQDEAR ALDTLDLVAQ VGINVVSLPL CNLYLQDRHA GRTPRGRGIT
LVHEMMARDI PVAFASDNTR DPFYAYGDMD MVEVMREATR IGHLDHGRFD WVRAFTATPA
AICGFDAPSL APGAPADLVI TRARSWNEFF SRPQSDRIVL RGGEPIDRTL PDYAELDDLM
ETPQ
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