Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1374 |
Symbol | |
ID | 5712550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 1427332 |
End bp | 1428321 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641267286 |
Product | NMT1/THI5 like domain protein |
Protein accession | YP_001532717 |
Protein GI | 159043923 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.353892 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.853253 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCGA CGATGATCGG ATTGGGGATC GCCGCCCTTG TGGGGGCAGG CGCCGCGCAA GCCGCGGACG AGGTGAAGCT GCAACTGAAA TGGGTCACCC AGGCCCAGTT CGCAGGCTAT TACGTGGCGC TCGACAAGGG GTTCTACGAG GAGGAGAACC TCGACGTGAC GATCCTGCCG GGCGGGCCGG ACATCGCGCC GACACAGGTG CTCGCCGGGG GCGGCGCGGA TGTCACCGTC GAGTGGATGC CTGCCGCGCT CGCCGCCCGG GAAAAGGGCC TGCCGCTGGT CAATATCGCC CAGCCGTTCA AATCGTCGGG CATGATGCTG ACCTGCTGGA AGGATGCCGG GATCGAGACG CCCGCCGACC TGTCCAACCG GACCCTGGGC GTGTGGTTCT TTGGCAACGA GTTTCCGTTC ATGTCCTGGA TGAGCCAGCT CGGCATCTCC ACCGAGGGCA AGTCCGAAAC CGGGGTCGAG GTGCTCAAGC AGGGCTTCAA TGTCGACCCG CTCCTGCAAC GGCAGGCGGA CTGTATCTCC ACCATGACCT ATAACGAATA CTGGCAGGTG ATCGATGCGG GCGTGGACCC GGACGAACTG GTCACCTTCA AGTACGAGGA CCAGGGCGTC GCGACGCTGG AAGACGGGCT CTACGTGCTG GAAGAGAATC TCTCCGACCC GGCCTTCGAG GACAAGATGG TGCGCTTCGT GCGGGCCTCT ATGCGCGGCT GGAAATACGC CGAGGAGAAC CCCGAGGAAG CCGCCGAGAT CGTGCTCGAC AACGACGCGA CAGGGGCGCA GACCGAAAGC CATCAGAAGC GCATGATGGG CGAGGTCGCG AAGCTGACCG CGGGCTCCAA CGGGGCGCTG GATCCGGCCG ATTACGAACG CACCGTTGCG ACGCTGCTGG CGGGCGGATC GGACCCGGTG ATCACCAGGC AGCCCGAAGG GGCCTGGACC CACGCGATCA CGGATGCGGC GCTGAACTGA
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Protein sequence | MKSTMIGLGI AALVGAGAAQ AADEVKLQLK WVTQAQFAGY YVALDKGFYE EENLDVTILP GGPDIAPTQV LAGGGADVTV EWMPAALAAR EKGLPLVNIA QPFKSSGMML TCWKDAGIET PADLSNRTLG VWFFGNEFPF MSWMSQLGIS TEGKSETGVE VLKQGFNVDP LLQRQADCIS TMTYNEYWQV IDAGVDPDEL VTFKYEDQGV ATLEDGLYVL EENLSDPAFE DKMVRFVRAS MRGWKYAEEN PEEAAEIVLD NDATGAQTES HQKRMMGEVA KLTAGSNGAL DPADYERTVA TLLAGGSDPV ITRQPEGAWT HAITDAALN
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