Gene Dshi_1370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1370 
Symboldht 
ID5712546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1422758 
End bp1424209 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content65% 
IMG OID641267282 
Productphenylhydantoinase 
Protein accessionYP_001532713 
Protein GI159043919 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0044] Dihydroorotase and related cyclic amidohydrolases 
TIGRFAM ID[TIGR02033] D-hydantoinase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.596955 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACAG TCATCAAGAA CGGAACCGTG GTCACCGCCG ACCTGACCTA CGAAGCGGAA 
GTGCGCGTCG AGGGGGGCAA GATCACCGAG ATCGGGCAGG GCCTGTCCGG GGACACGGTG
CTGGACGCGA CGGGCTGCTA CGTGATGCCC GGCGGGATCG ACCCGCACAC CCATCTGGAG
ATGCCCTTCA TGGGCACGTA CTCGTCGGAC GATTTCGAGA GTGGCACGCG CGCGGCGCTC
TCGGGGGGTA CCACGATGGT CGTGGATTTC GCCCTGCCGA GCCCGGGGCA GGGGCTGCTC
GATGCGATCC AGATGTGGGA CAACAAGTCG ACCCGGGCCA ATTGCGACTA CTCGTTCCAC
ATGGCGATCA CCTGGTGGGG GGAACAGGTC TTCAACGAGA TGGAGGCGGT CACGAAGCGC
GGCATCAACA CGTTCAAGCA TTTCATGGCC TACAAGGGCG CCCTGATGGT TAACGATGAC
GAGATGTTCG CCTCGTTCCG GCGCTGCGCC GAGTTGGGGG CGCTGCCGCT GGTGCATGCG
GAGAACGGCG ATGTGGTCGC GGATCTGCAG CAGAAATTTT TGGCCGAGGG CAATACCGGG
CCCGAAGCGC ACGCCTATTC CCGCCCCCCG GCGGTGGAGG GCGAGGCGAC CAACCGGGCC
ATCATGATCG CCGACATGGC AGGCGTGCCG GTCTATATCG TGCACACCTC CTGCGAAGAG
GCGCACGAGG CGATCCGGCG GGCGCGGATG CAGGGCAAGC GGGTCTATGG CGAGCCGCTG
ATCCAGCACC TGACCCTGGA CGAGAGCGAA TATGCCCATC CCGACTGGGA CCATGCGGCC
CGCCGGGTGA TGTCGCCCCC CTTCCGCAAC AAGCAGCACC AGGACTCCTT ATGGAACGGT
CTGGCCTCCG GCTCGCTGTC GGTGGTGGCG ACGGATCACT GCGCCTTCAC CACCGCGCAG
AAACGCACGG GCGTTGGCGA TTTCACCCAG ATCCCCAATG GCACCGGCGG GCTTGAGGAT
CGGATGCCGA TGCTCTGGAC CCACGGGGTG AATACCGGGC GGCTGACCCC GAACGAGTTC
GTGGCCGTCA CCTCGACCAA CATCGCCAAG ATCCTCAACT GCTATCCGAC CAAGGGGGCG
ATCCTTGTCG GCGCGGATGC CGATATCGTG GTCTGGGATC CGGAGAAGGA GAAGACCATC
TCTGCAGACA GCCAGCAATC CGCCATTGAT TACAACGTCT TCGAGGGCAA GCATGTGAAG
GGCCTGCCGC GCTACACGCT GACCCGGGGC CATGTGGCGG TGATGGATGG CGAGATTCGG
ACCCAGGAGG GCCACGGCAA GTTCGTCGAA CGCCCGCCGG TCACCCCGGT GTCCAAGGCG
CTCAGCACCT GGAAGGAGCT GACCGCCCCG CGCAAGGTGG AGCGGACCGG CATCCCCGCG
AGCGGAGTGT AA
 
Protein sequence
MSTVIKNGTV VTADLTYEAE VRVEGGKITE IGQGLSGDTV LDATGCYVMP GGIDPHTHLE 
MPFMGTYSSD DFESGTRAAL SGGTTMVVDF ALPSPGQGLL DAIQMWDNKS TRANCDYSFH
MAITWWGEQV FNEMEAVTKR GINTFKHFMA YKGALMVNDD EMFASFRRCA ELGALPLVHA
ENGDVVADLQ QKFLAEGNTG PEAHAYSRPP AVEGEATNRA IMIADMAGVP VYIVHTSCEE
AHEAIRRARM QGKRVYGEPL IQHLTLDESE YAHPDWDHAA RRVMSPPFRN KQHQDSLWNG
LASGSLSVVA TDHCAFTTAQ KRTGVGDFTQ IPNGTGGLED RMPMLWTHGV NTGRLTPNEF
VAVTSTNIAK ILNCYPTKGA ILVGADADIV VWDPEKEKTI SADSQQSAID YNVFEGKHVK
GLPRYTLTRG HVAVMDGEIR TQEGHGKFVE RPPVTPVSKA LSTWKELTAP RKVERTGIPA
SGV