| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1362 |
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| Symbol | |
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| ID | 5712538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1414985 |
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| End bp | 1416322 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641267274 |
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| Product | putative oxidoreductase |
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| Protein accession | YP_001532705 |
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| Protein GI | 159043911 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.90664 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTACCT CCCAGCATAC GCCAGGAGTG GTCCCGGGAA GGTTATCCGA GACAGAGCTT
GAGACCAATT TTTCGGACCT GCATGCGCCT TATGACGCCC ATGAGGCCCT GGTCGCGGCC
GACAGGTGCT ATTTCTGTCA CGACGCGCCC TGCATCACGG CCTGCCCAAC GGCGATCGAC
ATCCCGCTCT TCATTCGGCA GATCGCGACC GGCACGCCCG AGGCGGCGGC CAAAACGATC
TTCGACCAGA ACATCCTCGG GGGCATGTGC GCCCGGGTCT GCCCGACAGA GACCCTGTGC
GAGCAAGCCT GCGTGCGCGA AGTGGCCGAG GGCAAGCCGG TGGAGATCGG GCGCCTGCAA
CGCTACGCCA CCGACACGGT GATGGCTGCC GGGGTGCACC CCTATGCGCG TGCACCGGAG
ACGGGCAAGA AGATCGCCGT GGTGGGCGCG GGGCCGGCGG GCCTGGCCTG CGCGCACAGG
CTGGCGATGA AGGGGCACGG CGTCGATCTG TTCGACGCGA AACCCAAGCC GGGCGGCCTG
AACGAGTACG GTATTGCCAC TTACAAGACC GTCGACGACT TTGCCCAGGC AGAGGTCGAC
TGGTTGATGA AGATCGGCGG TATCACCCTG CAGTCCGGAA AGGCGCTGGG GCGCGACCTG
ACGCTCGGCG AGTTGTCGGA AGATTACGAC GCGGTTTTCC TGTCCATCGG GCTGGCGGGC
GTGAATGCAC TCGGTGTCGC GGGCTCTGAG ATGAAAAACG TCATGGATGC CGTTGATTTC
ATTTCTAATC TGCGCCAAGC CAAGGATAAG CGCGAGGTCC CCGTGGGCCG CCGCGTCGTC
GTTATCGGGG GCGGCATGAC TGCGGTCGAT GCGGCGGTGC AATCGCGGCT TCTGGGGGCC
GAGGACGTGA CCATTGCCTA TCGCCGCGAC AAGGCCGCCA TGAGTGCGAG CGAGTTCGAG
CAGAAGCTCG CCACCGCCAA GGGGGTGCGC ATTCTCTACA ACGCGCAACC CCAGCGCATT
GTCGGCAACG GGGCGTGCGA GGCCGTGGAA TTCGCCTATA CCGAGACCAC GCCGGACGGG
CTGCGCACCA CCGGCGAGAC GCGGACCCTG CCGGCCGATC AGGTGCTCAC CGCCATTGGC
CAGACCTTGA CCGGGACACC GGATGGCCTC GCGCTGGAGC ATGGCAAGAT CGCCGTGACC
GGCGCGGGGC GGACCAGCTT GCCGGGTGTG TGGGCCGGAG GCGACTGCGC CCTGGGCGGC
GAGGACCTGA CCGTGACCGC CGTGGCCGAG GGACGTGATG CGGCCGAAGA CATTCATGCA
AGCCTGATGG GCGTCTAG
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| Protein sequence | MSTSQHTPGV VPGRLSETEL ETNFSDLHAP YDAHEALVAA DRCYFCHDAP CITACPTAID
IPLFIRQIAT GTPEAAAKTI FDQNILGGMC ARVCPTETLC EQACVREVAE GKPVEIGRLQ
RYATDTVMAA GVHPYARAPE TGKKIAVVGA GPAGLACAHR LAMKGHGVDL FDAKPKPGGL
NEYGIATYKT VDDFAQAEVD WLMKIGGITL QSGKALGRDL TLGELSEDYD AVFLSIGLAG
VNALGVAGSE MKNVMDAVDF ISNLRQAKDK REVPVGRRVV VIGGGMTAVD AAVQSRLLGA
EDVTIAYRRD KAAMSASEFE QKLATAKGVR ILYNAQPQRI VGNGACEAVE FAYTETTPDG
LRTTGETRTL PADQVLTAIG QTLTGTPDGL ALEHGKIAVT GAGRTSLPGV WAGGDCALGG
EDLTVTAVAE GRDAAEDIHA SLMGV
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